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veupathdb/rserve:8.2.1

Manifest digest

sha256:b1c7f3d518394ca76ce70a89e33fd05a41f6670f384fbb7317df21509c4d842a

OS/ARCH

linux/amd64

Compressed size

657.03 MB

Last pushed

over 1 year by ebrcbot

Type

Image

Manifest digest

sha256:b1c7f3d518394ca76ce70a89e33fd05a41f6670f384fbb7317df21509c4d842a

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.17 MB
6CMD ["/bin/bash"]0 B
7LABEL org.opencontainers.image.licenses=GPL-2.0-or-later org.opencontainers.image.source=https://github.com/rocker-org/rocker-versioned2 org.opencontainers.image.vendor=Rocker Project0 B
8ENV R_VERSION=4.3.20 B
9ENV R_HOME=/usr/local/lib/R0 B
10ENV TZ=Etc/UTC0 B
11COPY scripts/install_R_source.sh /rocker_scripts/install_R_source.sh # buildkit1.81 KB
12RUN /bin/sh -c /rocker_scripts/install_R_source.sh #258.05 MB
13ENV CRAN=https://p3m.dev/cran/__linux__/jammy/2024-02-280 B
14ENV LANG=en_US.UTF-80 B
15COPY scripts /rocker_scripts # buildkit23.04 KB
16RUN /bin/sh -c /rocker_scripts/setup_R.sh #26.29 MB
17CMD ["R"]0 B
18/bin/sh -c useradd rserve &&2.64 KB
19/bin/sh -c apt-get update &&114.9 MB
20/bin/sh -c R -e "install.packages('Rserve',1.4 MB
21/bin/sh -c R -e "install.packages('bit64')"1.6 MB
22/bin/sh -c R -e "install.packages('data.table')"2.16 MB
23/bin/sh -c R -e "install.packages('dplyr')"8.4 MB
24/bin/sh -c R -e "install.packages('jsonlite')"1.07 MB
25/bin/sh -c R -e "install.packages('remotes')"402.71 KB
26/bin/sh -c R -e "install.packages('Rcpp')"2.15 MB
27/bin/sh -c R -e "install.packages('readr')"3.21 MB
28/bin/sh -c R -e "install.packages('digest')"212.28 KB
29/bin/sh -c R -e "install.packages('Hmisc')"43.34 MB
30/bin/sh -c R -e "install.packages('BiocManager')"547.15 KB
31/bin/sh -c R -e "BiocManager::install('SummarizedExperiment')"37.02 MB
32/bin/sh -c R -e "BiocManager::install('DESeq2')"21.84 MB
33/bin/sh -c R -e "BiocManager::install('Maaslin2')"78.34 MB
34/bin/sh -c R -e "remotes::install_github('zdk123/SpiecEasi','v1.1.1',17.14 MB
35/bin/sh -c R -e "remotes::install_github('VEuPathDB/veupathUtils',3.22 MB
36/bin/sh -c R -e "remotes::install_github('VEuPathDB/plot.data',3.46 MB
37/bin/sh -c R -e "remotes::install_github('microbiomeDB/microbiomeComputations',4.12 MB
38/bin/sh -c mkdir -p /opt/rserve246 B
39ENV RSERVE_HOME /opt/rserve0 B
40COPY file:e409f2a2f7ce11121ec8ab71255c01c4f7105d081150a00f28ceda22ce151a35 in /etc/Rserv.conf 350 B
41/bin/sh -c mkdir ${RSERVE_HOME}/lib314 B
42COPY dir:14635f82b7d5468662853121adc9febf4bd3b716fa0db3fc6e8c3ead59b23960 in ${RSERVE_HOME}/lib/ 1008 B
43/bin/sh -c mkdir ${RSERVE_HOME}/work319 B
44EXPOSE 63110 B
45ENV DEBUG FALSE0 B
46CMD R -e "Rserve::Rserve(debug =0 B
47LABEL "org.veupathdb.scm.git_commit"="8dd94a9fae8d9cd38a74dd3041fe80c9703cce22"0 B
48LABEL "org.veupathdb.scm.git_url"="https://github.com/VEuPathDB/Rserve.git"0 B

Command

 ARG RELEASE