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veupathdb/apollo:2.5

Manifest digest

sha256:bbdbfae8ad3334e364e57df22bd0f2457de3d482c44782b193610eb89ff69e66

OS/ARCH

linux/amd64

Compressed size

1.7 GB

Last pushed

over 6 years by ebrcbot

Type

Image

Manifest digest

sha256:bbdbfae8ad3334e364e57df22bd0f2457de3d482c44782b193610eb89ff69e66

Image Layers

Image Layers

1ADD file ... in / 44.83 MB
2CMD ["bash"]0 B
3/bin/sh -c apt-get update &&10.64 MB
4/bin/sh -c set -ex; if4.25 MB
5/bin/sh -c apt-get update &&50.24 MB
6/bin/sh -c set -eux; apt-get4.86 MB
7ENV LANG=C.UTF-80 B
8ENV JAVA_HOME=/usr/local/openjdk-80 B
9ENV PATH=/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
10/bin/sh -c { echo '#/bin/sh';250 B
11ENV JAVA_VERSION=8u2320 B
12ENV JAVA_BASE_URL=https://github.com/AdoptOpenJDK/openjdk8-upstream-binaries/releases/download/jdk8u232-b09/OpenJDK8U-jdk_0 B
13ENV JAVA_URL_VERSION=8u232b090 B
14/bin/sh -c set -eux; dpkgArch="$(dpkg103.37 MB
15ENV CATALINA_HOME=/usr/local/tomcat0 B
16ENV PATH=/usr/local/tomcat/bin:/usr/local/openjdk-8/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
17/bin/sh -c mkdir -p "$CATALINA_HOME"168 B
18WORKDIR /usr/local/tomcat0 B
19ENV TOMCAT_NATIVE_LIBDIR=/usr/local/tomcat/native-jni-lib0 B
20ENV LD_LIBRARY_PATH=/usr/local/tomcat/native-jni-lib0 B
21ENV GPG_KEYS=05AB33110949707C93A279E3D3EFE6B686867BA6 07E48665A34DCAFAE522E5E6266191C37C037D42 47309207D818FFD8DCD3F83F1931D684307A10A50 B
22ENV TOMCAT_MAJOR=90 B
23ENV TOMCAT_VERSION=9.0.290 B
24ENV TOMCAT_SHA512=9da7c13b2bb7ea1b1bb0c35f8e3581627512f03d76ba15831733a35725b79ab933b747d63fcb4c9a8f5200a6655009a1ba2b9e0a171fa86065aff36d57bfa8080 B
25/bin/sh -c set -eux; savedAptMark="$(apt-mark11.77 MB
26/bin/sh -c set -e &&152 B
27EXPOSE 80800 B
28CMD ["catalina.sh" "run"]0 B
29MAINTAINER Nathan Dunn <[email protected]>0 B
30ENV DEBIAN_FRONTEND=noninteractive0 B
31ENV CATALINA_HOME=/usr/local/tomcat0 B
32ENV CONTEXT_PATH=ROOT0 B
33/bin/sh -c apt-get -qq update261.78 MB
34/bin/sh -c curl -sL https://deb.nodesource.com/setup_8.x10.52 MB
35/bin/sh -c apt-get -qq update20.89 MB
36/bin/sh -c npm i -g2.51 MB
37/bin/sh -c cp /usr/lib/jvm/java-8-openjdk-amd64/lib/tools.jar /usr/lib/jvm/java-8-openjdk-amd64/jre/lib/ext/tools.jar5.69 MB
38/bin/sh -c curl -s "http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/blat/blat"23.29 MB
39ADD dir:73e55174b60fe61b98e86e0913fd79971d8a840b9d0ce054020e488d5fb5e3db in /apollo 90.87 MB
40COPY file:3ddccaa8c40a15abe8246ddebc02ebea6b9a9ca59aae435cf9da42de6c1eca4b in /bin/build.sh 409 B
41ADD file ... in /apollo/apollo-config.groovy 2.12 KB
42/bin/sh -c chown -R apollo:apollo90.87 MB
43USER apollo0 B
44/bin/sh -c curl -s get.sdkman.io118.37 MB
45USER root0 B
46/bin/sh -c rm -rf ${CATALINA_HOME}/webapps/*114.09 MB
47ADD file ... in /createenv.sh 938 B
48ADD file ... in /launch.sh 1.25 KB
49CMD ["/bin/sh" "-c" "\"/launch.sh\""]0 B
50/bin/sh -c cd /usr/local/tomcat/webapps &&111.93 MB
51COPY JBrowse/plugins/ /usr/local/tomcat/webapps/ROOT/jbrowse/plugins/89.1 MB
52/bin/sh -c cd /usr/local/tomcat/webapps/ROOT/jbrowse/plugins &&525.23 MB
53/bin/sh -c apt-get update &&46.27 MB
54COPY apollo_files/apollo-config.groovy /usr/local/tomcat/webapps/ROOT/WEB-INF/classes/apollo-config.groovy2.36 KB
55COPY apollo_files/jbrowse.conf /usr/local/tomcat/webapps/ROOT/jbrowse/794 B

Command

ADD file:152359c10cf61d80091bfd19e7e1968a538bebebfa048dca0386e35e1e999730 in /