staphb/vadr:1.6.4-rsv

Index digest

sha256:885a2f23a8e7a8e8c258f0e6fd1442876f485689b6a62f3df3a4f9f5544e99ae

OS/ARCH

linux/amd64

Compressed size

522.29 MB

Last pushed

about 1 year by staphbadmin

Type

Image

Manifest digest

sha256:6741f12c3eaad6247fb220bb00532c5ef15884a9d72ec83fd06702e8cf0fd79b

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 28.17 MB

6CMD ["/bin/bash"]0 B

7ENV VADR_VERSION=1.6.4 VADR_RSV_MODELS_VER=1.5-2 LC_ALL=C VADRINSTALLDIR=/opt/vadr0 B

8

ENV VADRSCRIPTSDIR=/opt/vadr/vadr VADRMINISCRIPTSDIR=/opt/vadr/vadr/miniscripts VADRMODELDIR=/opt/vadr/vadr-models VADRINFERNALDIR=/opt/vadr/infernal/binaries

0 B

9

ENV PERL5LIB=/opt/vadr/vadr:/opt/vadr/sequip:/opt/vadr/Bio-Easel/blib/lib:/opt/vadr/Bio-Easel/blib/arch: PATH=/opt/vadr/vadr:/opt/vadr/vadr/miniscripts:/opt/vadr/infernal/binaries:/opt/vadr/Bio-Easel:/opt/vadr/sequip:/opt/vadr/ncbi-blast/bin:/opt/vadr/fasta/bin:/opt/vadr/minimap2:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

10LABEL base.image=ubuntu:jammy0 B

11LABEL dockerfile.version=10 B

12LABEL software=VADR0 B

13LABEL software.version=1.6.40 B

14LABEL description=Classification and annotation of0 B

15LABEL website=https://github.com/ncbi/vadr0 B

16LABEL license=https://github.com/ncbi/vadr/blob/master/LICENSE0 B

17LABEL maintainer=Curtis Kapsak0 B

18LABEL [email protected]0 B

19RUN /bin/sh -c apt-get update95.02 MB

20RUN /bin/sh -c mkdir -p393.81 MB

21

RUN /bin/sh -c wget https://ftp.ncbi.nlm.nih.gov/pub/nawrocki/vadr-models/rsv/${VADR_RSV_MODELS_VER}/vadr-models-rsv-${VADR_RSV_MODELS_VER}.tar.gz

5.29 MB

22WORKDIR /data32 B

23CMD ["v-annotate.pl" "-h"]0 B

Command

 ARG RELEASE