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staphb/vadr:1.6.3-hav-flu2

Index digest

sha256:e4f801b46b0eea8b59f49da7c54349afa894e4ee167858d9ac03953731b5f5fe

OS/ARCH

linux/amd64

Compressed size

878.52 MB

Last pushed

over 2 years by staphbadmin

Type

Image

Manifest digest

sha256:118468c91d688045fead3c2fb439b061950d56b91716af8a609437abd70bb10f

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=20.040 B
5ADD file ... in / 26.24 MB
6CMD ["/bin/bash"]0 B
7ENV VADR_VERSION=1.6.3 VADR_SARSCOV2_MODELS_VERSION=1.3-2 VADR_MPXV_MODELS_VERSION=1.4.2-1 VADR_RSV_MODELS_VER=1.5-20 B
8ENV VADRSCRIPTSDIR=/opt/vadr/vadr VADRMINISCRIPTSDIR=/opt/vadr/vadr/miniscripts VADRMODELDIR=/opt/vadr/vadr-models VADRINFERNALDIR=/opt/vadr/infernal/binaries0 B
9ENV PERL5LIB=/opt/vadr/vadr:/opt/vadr/sequip:/opt/vadr/Bio-Easel/blib/lib:/opt/vadr/Bio-Easel/blib/arch: PATH=/opt/vadr/vadr:/opt/vadr/vadr/miniscripts:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
10LABEL base.image=ubuntu:focal0 B
11LABEL dockerfile.version=10 B
12LABEL software=VADR0 B
13LABEL software.version=1.6.30 B
14LABEL description=Classification and annotation of0 B
15LABEL website=https://github.com/ncbi/vadr0 B
16LABEL license=https://github.com/ncbi/vadr/blob/master/LICENSE0 B
17LABEL maintainer=Anders Goncalves da Silva0 B
18LABEL [email protected]0 B
19LABEL maintainer2=Curtis Kapsak0 B
20LABEL [email protected]0 B
21LABEL maintainer3=Ines Mendes0 B
22LABEL [email protected]0 B
23RUN /bin/sh -c apt-get update77.81 MB
24RUN /bin/sh -c mkdir -p654.52 MB
25RUN /bin/sh -c wget -O75.51 MB
26RUN /bin/sh -c wget https://ftp.ncbi.nlm.nih.gov/pub/nawrocki/vadr-models/rsv/${VADR_RSV_MODELS_VER}/vadr-models-rsv-${VADR_RSV_MODELS_VER}.tar.gz5.28 MB
27RUN /bin/sh -c wget https://ftp.ncbi.nlm.nih.gov/pub/nawrocki/vadr-models/flu/${VADR_FLU_MODELS_VER}/vadr-models-flu-${VADR_FLU_MODELS_VER}.tar.gz38.03 MB
28RUN /bin/sh -c wget https://github.com/theiagen/VADR_models/archive/refs/tags/v${VADR_HAV_MODELS_VER}.tar.gz1.13 MB
29WORKDIR /data32 B

Command

 ARG RELEASE