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staphb/panaroo:1.5.1

Machine learning & AI
Data science
Index digest

sha256:f61f1b69051357cd1116574b87b77bfb917f394687a359607dfd05a27a16a719

OS/ARCH

linux/amd64

Compressed size

1.07 GB

Last pushed

over 1 year by staphbadmin

Type

Image

Manifest digest

sha256:3639321f443ab5ec791acc248fd418375113493dc18267800472d112cd3af2c9

Image Layers

Image Layers

1ADD file ... in / 27.77 MB
2CMD ["bash"]0 B
3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
4ENV ENV_NAME=base0 B
5ENV MAMBA_ROOT_PREFIX=/opt/conda0 B
6ENV MAMBA_EXE=/bin/micromamba0 B
7COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit119.8 KB
8COPY /tmp/bin/micromamba /bin/micromamba # buildkit5.78 MB
9RUN /bin/sh -c { grep32 B
10ARG MAMBA_USER=mambauser0 B
11ARG MAMBA_USER_ID=574390 B
12ARG MAMBA_USER_GID=574390 B
13ENV MAMBA_USER=mambauser0 B
14ENV MAMBA_USER_ID=574390 B
15ENV MAMBA_USER_GID=574390 B
16COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit527 B
17COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit285 B
18RUN |3 MAMBA_USER=mambauser MAMBA_USER_ID=57439 MAMBA_USER_GID=574393.69 KB
19USER mambauser0 B
20WORKDIR /tmp32 B
21COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit217 B
22COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit686 B
23COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit650 B
24ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B
25CMD ["/bin/bash"]0 B
26COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit345 B
27SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B
28ARG PANAROO_SOFTWARE_VERSION=1.5.10 B
29USER root0 B
30WORKDIR /0 B
31LABEL base.image=mambaorg/micromamba:1.5.70 B
32LABEL dockerfile.version=10 B
33LABEL software=Panaroo0 B
34LABEL software.version=1.5.10 B
35LABEL description=An updated pipeline for0 B
36LABEL website=https://github.com/gtonkinhill/panaroo0 B
37LABEL license=https://github.com/gtonkinhill/panaroo/blob/master/LICENSE0 B
38LABEL maintainer=Kevin Libuit0 B
39LABEL [email protected]0 B
40LABEL maintainer2=Erin Young0 B
41LABEL [email protected]0 B
42RUN |1 PANAROO_SOFTWARE_VERSION=1.5.1 /usr/local/bin/_dockerfile_shell.sh apt-get4.13 MB
43RUN |1 PANAROO_SOFTWARE_VERSION=1.5.1 /usr/local/bin/_dockerfile_shell.sh micromamba1.03 GB
44ENV PATH=/opt/conda/bin:/opt/conda/envs/base/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LC_ALL=C.UTF-80 B
45WORKDIR /data94 B
46CMD ["/usr/local/bin/_dockerfile_shell.sh" "panaroo -h"]0 B

Command

ADD file:b86ae1c7ca3586d8feedcd9ff1b2b1e8ab872caf6587618f1da689045a5d7ae4 in /