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poldracklab/fmriprep:20.0.7

Manifest digest

sha256:e5c3cac7ff83ac9061a1d68965831b16d071925efdc8818c4558ec9dca84040d

OS/ARCH

linux/amd64

Compressed size

5.05 GB

Last pushed

over 6 years by bidsappsdev

Type

Image

Manifest digest

sha256:e5c3cac7ff83ac9061a1d68965831b16d071925efdc8818c4558ec9dca84040d

Image Layers

Image Layers

1ADD file ... in / 42.1 MB
2/bin/sh -c rm -rf /var/lib/apt/lists/*525 B
3/bin/sh -c set -xe &&844 B
4/bin/sh -c mkdir -p /run/systemd168 B
5CMD ["/bin/bash"]0 B
6COPY file:4ea5bd1e0c912137c2d7906b7b7bbea0b06e584acc726aa396c4719c22ee84f1 in /usr/local/etc/neurodebian.gpg 3.33 KB
7/bin/sh -c apt-get update &&147.81 MB
8/bin/sh -c curl -o pandoc-2.2.2.1-1-amd64.deb25.08 MB
9/bin/sh -c curl -sSL https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.1/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1.tar.gz2.76 GB
10ENV FSL_DIR=/usr/share/fsl/5.0 OS=Linux FS_OVERRIDE=00 B
11ENV SUBJECTS_DIR=/opt/freesurfer/subjects FUNCTIONALS_DIR=/opt/freesurfer/sessions MNI_DIR=/opt/freesurfer/mni0 B
12ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PATH=/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
13/bin/sh -c curl -sSL "http://neuro.debian.net/lists/$(16.71 KB
14/bin/sh -c apt-get update &&254.96 MB
15ENV FSLDIR=/usr/share/fsl/5.0 FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE0 B
16ENV PATH=/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
17ENV ANTSPATH=/usr/lib/ants0 B
18/bin/sh -c mkdir -p $ANTSPATH504.27 MB
19ENV PATH=/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
20/bin/sh -c curl -sL https://deb.nodesource.com/setup_10.x18.36 MB
21/bin/sh -c apt-get install -y212 B
22/bin/sh -c npm install -g2.87 MB
23/bin/sh -c npm install -g139.61 MB
24/bin/sh -c mkdir -p /opt/ICA-AROMA183.96 KB
25ENV PATH=/opt/ICA-AROMA:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin AROMA_VERSION=0.4.50 B
26/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda3-4.5.11-Linux-x86_64.sh147.45 MB
27ENV PATH=/usr/local/miniconda/bin:/opt/ICA-AROMA:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin CPATH=/usr/local/miniconda/include/: LANG=C.UTF-80 B
28/bin/sh -c conda install -y590.65 MB
29ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
30/bin/sh -c useradd -m -s4.46 KB
31WORKDIR /home/fmriprep0 B
32ENV HOME=/home/fmriprep0 B
33/bin/sh -c python -c "from17.6 KB
34COPY file:0626a0c581d970bc50b6cb400d8cb5327d1f0742aadc0973bbb010cd5ffdbed4 in fmriprep-setup.cfg 1.24 KB
35/bin/sh -c pip install --no-cache-dir166.67 MB
36COPY dir:0ede836c993f7d84da3898fbfc15af8eebadc1bdabbf978792c11e82c5c1272b in /src/fmriprep 22.52 MB
37ARG VERSION0 B
38|1 VERSION=20.0.7 /bin/sh -c echo124.71 MB
39|1 VERSION=20.0.7 /bin/sh -c install702 B
40|1 VERSION=20.0.7 /bin/sh -c find157.83 MB
41ENV IS_DOCKER_8395080871=10 B
42|1 VERSION=20.0.7 /bin/sh -c ldconfig13.3 KB
43WORKDIR /tmp/0 B
44ENTRYPOINT ["/usr/local/miniconda/bin/fmriprep"]0 B
45ARG BUILD_DATE0 B
46ARG VCS_REF0 B
47ARG VERSION0 B
48LABEL org.label-schema.build-date=2020-05-05T14:38:31Z org.label-schema.name=fMRIPrep org.label-schema.description=fMRIPrep0 B

Command

ADD file:4b2eb5cd0b37ca0154f3c5ad9212f5bc7244a35806395a9c76a96723d708b83a in /