nextstrain/ncov-ingest:branch-snakemake-v9

Index digest

sha256:8a5d8a94918e82cc62256c248fd9b40ceb06117d75f480489f4e3c8c0ff0d4a0

OS/ARCH

linux/amd64

Compressed size

831.09 MB

Last pushed

about 1 year by nextstrainbot

Type

Image

Manifest digest

sha256:833ca94f1b2d5680208bfba3c6148106abac063d0463dbb3d7ccafaa55b94d3f

Image Layers

Image Layers

1# debian.sh --arch 'amd64' out/26.92 MB

2ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

3ENV LANG=C.UTF-80 B

4RUN /bin/sh -c set -eux;3.35 MB

5ENV GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D0 B

6ENV PYTHON_VERSION=3.11.130 B

7ENV PYTHON_SHA256=8fb5f9fbc7609fa822cb31549884575db7fd9657cbffb89510b5d7975963a83a0 B

8RUN /bin/sh -c set -eux;15.46 MB

9RUN /bin/sh -c set -eux;249 B

10CMD ["python3"]0 B

11SHELL [/bin/bash -e -u -o0 B

12RUN /bin/bash -e -u -o87.12 MB

13RUN /bin/bash -e -u -o48.95 MB

14ARG TARGETPLATFORM=linux/amd640 B

15COPY bashrc /etc/bash.bashrc # buildkit370 B

16COPY /final/bin/ /usr/local/bin/ # buildkit65.36 MB

17COPY /final/share/ /usr/local/share/ # buildkit38.14 KB

18COPY /final/libexec/ /usr/local/libexec/ # buildkit15.51 MB

19ENV MAFFT_BINARIES=/usr/local/libexec0 B

20RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e40.1 MB

21COPY /usr/local/lib/python3.11/site-packages/ /usr/local/lib/python3.11/site-packages/ # buildkit431.79 MB

22COPY /usr/local/libexec/awscli/ /usr/local/libexec/awscli/ # buildkit18.55 MB

23COPY /usr/local/bin/augur /usr/local/bin/aws /usr/local/bin/bio /usr/local/bin/envdir1.43 KB

24COPY /usr/lib/node_modules/ /usr/lib/node_modules/ # buildkit2.32 MB

25RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e191 B

26RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e1.08 KB

27COPY --chown=nextstrain:nextstrain /nextstrain /nextstrain #46.32 MB

28COPY --chown=nextstrain:nextstrain /nextstrain /nextstrain #7.23 MB

29COPY entrypoint entrypoint-aws-batch drop-privs create-envd2.19 KB

30RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e32 B

31RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e100 B

32ENV HOME=/nextstrain0 B

33USER nextstrain:nextstrain0 B

34ENV NEXTSTRAIN_HOME=/nextstrain0 B

35RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e411.01 KB

36WORKDIR /nextstrain/build128 B

37RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e32 B

38USER root0 B

39ENTRYPOINT ["/sbin/entrypoint"]0 B

40ARG GIT_REVISION=0d9577d5457edf962666430ba5f8e164b0b9cf0c0 B

41LABEL maintainer=Nextstrain team <[email protected]>0 B

42LABEL org.opencontainers.image.authors=Nextstrain team <[email protected]>0 B

43LABEL org.opencontainers.image.source=https://github.com/nextstrain/docker-base0 B

44LABEL org.opencontainers.image.revision=0d9577d5457edf962666430ba5f8e164b0b9cf0c0 B

45LABEL org.nextstrain.image.name=nextstrain/base0 B

46RUN /bin/bash -e -u -o17.47 MB

47COPY requirements.txt /nextstrain/ncov-ingest/ # buildkit243 B

48RUN /bin/bash -e -u -o4.2 MB

49ENV PATH=./bin:/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

50ARG GIT_REVISION=99bd9ba0 B

51LABEL org.opencontainers.image.source=https://github.com/nextstrain/ncov-ingest0 B

52LABEL org.opencontainers.image.revision=99bd9ba0 B

53LABEL org.nextstrain.image.name=nextstrain/ncov-ingest0 B

Command

# debian.sh --arch 'amd64' out/ 'bookworm' '@1751241600'