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nanozoo/dada2:latest

Multi-platform
Index digest

sha256:76a5df9b39ac49bf8326c43d3f39f0f61de479be89a12f60d9acf7ffa1f2acfe

OS/ARCH

Compressed size

1.62 GB

Last pushed

8 months by nanozoobot

Type

Image

Manifest digest

sha256:8e3054d50bee734ed236b01735921bfbf632cfe83904da22a30c35da305aff5d

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 27.55 MB
6CMD ["/bin/bash"]0 B
7ENV R_VERSION=4.4.20 B
8ENV R_HOME=/usr/local/lib/R0 B
9ENV TZ=Etc/UTC0 B
10COPY scripts/install_R_source.sh /rocker_scripts/install_R_source.sh # buildkit1.81 KB
11RUN /bin/sh -c /rocker_scripts/install_R_source.sh #271.88 MB
12ENV CRAN=https://p3m.dev/cran/__linux__/noble/latest0 B
13ENV LANG=en_US.UTF-80 B
14COPY scripts/bin/ /rocker_scripts/bin/ # buildkit2.76 KB
15COPY scripts/setup_R.sh /rocker_scripts/setup_R.sh # buildkit1.5 KB
16RUN /bin/sh -c if grep17.82 MB
17ENV S6_VERSION=v2.1.0.20 B
18ENV RSTUDIO_VERSION=2024.12.0+4670 B
19ENV DEFAULT_USER=rstudio0 B
20COPY scripts/install_rstudio.sh /rocker_scripts/install_rstudio.sh # buildkit1.87 KB
21COPY scripts/install_s6init.sh /rocker_scripts/install_s6init.sh # buildkit751 B
22COPY scripts/default_user.sh /rocker_scripts/default_user.sh # buildkit718 B
23COPY scripts/init_set_env.sh /rocker_scripts/init_set_env.sh # buildkit525 B
24COPY scripts/init_userconf.sh /rocker_scripts/init_userconf.sh # buildkit3.12 KB
25COPY scripts/pam-helper.sh /rocker_scripts/pam-helper.sh # buildkit343 B
26RUN /bin/sh -c /rocker_scripts/install_rstudio.sh #332.08 MB
27EXPOSE map[8787/tcp:{}]0 B
28CMD ["/init"]0 B
29COPY scripts/install_pandoc.sh /rocker_scripts/install_pandoc.sh # buildkit1.25 KB
30RUN /bin/sh -c /rocker_scripts/install_pandoc.sh #34.55 MB
31COPY scripts/install_quarto.sh /rocker_scripts/install_quarto.sh # buildkit1.06 KB
32RUN /bin/sh -c /rocker_scripts/install_quarto.sh #285.1 KB
33COPY scripts /rocker_scripts # buildkit20.04 KB
34ENV BIOCONDUCTOR_USE_CONTAINER_REPOSITORY=FALSE0 B
35COPY / / # buildkit793.09 MB
36LABEL name=bioconductor/bioconductor_docker version= url=https://github.com/Bioconductor/bioconductor_docker vendor=Bioconductor0 B
37ARG BIOCONDUCTOR_VERSION=3.200 B
38ARG BIOCONDUCTOR_PATCH=350 B
39ARG BIOCONDUCTOR_DOCKER_VERSION=3.20.350 B
40ARG TARGETPLATFORM=linux/arm640 B
41ENV TARGETPLATFORM=linux/arm640 B
42ENV PLATFORM=linux/arm640 B
43ENV LIBSBML_CFLAGS=-I/usr/include0 B
44ENV LIBSBML_LIBS=-lsbml0 B
45ENV BIOCONDUCTOR_DOCKER_VERSION=3.20.350 B
46ENV BIOCONDUCTOR_VERSION=3.200 B
47ENV BIOCONDUCTOR_NAME=bioconductor_docker0 B
48CMD ["/init"]0 B
49ENV TOOL=dada20 B
50ENV VERSION=1.34.00 B
51ARG DEBIAN_FRONTEND=noninteractive0 B
52USER root0 B
53RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c49.97 MB
54RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c133.34 MB
55ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
56WORKDIR /data94 B

Command

 ARG RELEASE