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mercureimaging/mercure-totalsegmentator:latest

Manifest digest

sha256:11b2ff3699fa7ea0b30baa246fcb804e923836f755e3502d78cf320f291c9038

OS/ARCH

linux/amd64

Compressed size

9.71 GB

Last pushed

over 2 years by amansaimbhi

Type

Image

Manifest digest

sha256:11b2ff3699fa7ea0b30baa246fcb804e923836f755e3502d78cf320f291c9038

Image Layers

Image Layers

1ADD file ... in / 27.8 MB
2CMD ["bash"]0 B
3LABEL maintainer=Anaconda, Inc0 B
4ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
5RUN /bin/sh -c apt-get update59.41 MB
6ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
7CMD ["/bin/bash"]0 B
8ARG INSTALLER_URL_LINUX64=https://repo.anaconda.com/miniconda/Miniconda3-py312_24.4.0-0-Linux-x86_64.sh0 B
9ARG SHA256SUM_LINUX64=b6597785e6b071f1ca69cf7be6d0161015b96340b9a9e132215d5713408c3a7c0 B
10ARG INSTALLER_URL_S390X=https://repo.anaconda.com/miniconda/Miniconda3-py312_24.4.0-0-Linux-s390x.sh0 B
11ARG SHA256SUM_S390X=e973f1b6352d58b1ab35f30424f1565d7ffa469dcde2d52c86ec1c117db11aad0 B
12ARG INSTALLER_URL_AARCH64=https://repo.anaconda.com/miniconda/Miniconda3-py312_24.4.0-0-Linux-aarch64.sh0 B
13ARG SHA256SUM_AARCH64=832d48e11e444c1a25f320fccdd0f0fabefec63c1cd801e606836e1c9c76ad510 B
14RUN |6 INSTALLER_URL_LINUX64=https://repo.anaconda.com/miniconda/Miniconda3-py312_24.4.0-0-Linux-x86_64.sh SHA256SUM_LINUX64=b6597785e6b071f1ca69cf7be6d0161015b96340b9a9e132215d5713408c3a7c INSTALLER_URL_S390X=https://repo.anaconda.com/miniconda/Miniconda3-py312_24.4.0-0-Linux-s390x.sh143.67 MB
15RUN /bin/sh -c mkdir -m777110 B
16WORKDIR /app32 B
17ADD docker-entrypoint.sh ./ # buildkit279 B
18ADD mercure-totalsegmentator ./mercure-totalsegmentator # buildkit6 KB
19RUN /bin/sh -c chmod 777292 B
20RUN /bin/sh -c conda create153.71 MB
21RUN /bin/sh -c echo "source170 B
22ENV PATH=/opt/conda/envs/env/bin:/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
23RUN /bin/sh -c chmod -R64.48 MB
24RUN /bin/sh -c apt-get update125.94 MB
25RUN /bin/sh -c apt-get update146.1 MB
26RUN /bin/sh -c apt-get install590.74 KB
27ADD environment.yml ./ # buildkit398 B
28RUN /bin/sh -c conda env6.28 GB
29RUN /bin/sh -c echo "source190 B
30ENV PATH=/opt/conda/envs/$(head -1 ./environment.yml |0 B
31RUN /bin/sh -c python -m7.61 KB
32RUN /bin/sh -c python -m136.56 MB
33WORKDIR /root32 B
34RUN /bin/sh -c mkdir -m777139 B
35ENV WEIGHTS_DIR=/app/totalsegmentator/nnunet/results/nnUNet/3d_fullres/0 B
36RUN /bin/sh -c mkdir -m777217 B
37ENV WEIGHTS_URL_1=https://zenodo.org/record/6802342/files/Task251_TotalSegmentator_part1_organs_1139subj.zip0 B
38ENV WEIGHTS_ZIP_1=Task251_TotalSegmentator_part1_organs_1139subj.zip0 B
39RUN /bin/sh -c wget --directory-prefix223.84 MB
40ENV WEIGHTS_URL_2=https://zenodo.org/record/6802358/files/Task252_TotalSegmentator_part2_vertebrae_1139subj.zip0 B
41ENV WEIGHTS_ZIP_2=Task252_TotalSegmentator_part2_vertebrae_1139subj.zip0 B
42RUN /bin/sh -c wget --directory-prefix218.24 MB
43ENV WEIGHTS_URL_3=https://zenodo.org/record/6802360/files/Task253_TotalSegmentator_part3_cardiac_1139subj.zip0 B
44ENV WEIGHTS_ZIP_3=Task253_TotalSegmentator_part3_cardiac_1139subj.zip0 B
45RUN /bin/sh -c wget --directory-prefix224.25 MB
46ENV WEIGHTS_URL_4=https://zenodo.org/record/6802366/files/Task254_TotalSegmentator_part4_muscles_1139subj.zip0 B
47ENV WEIGHTS_ZIP_4=Task254_TotalSegmentator_part4_muscles_1139subj.zip0 B
48RUN /bin/sh -c wget --directory-prefix224.14 MB
49ENV WEIGHTS_URL_5=https://zenodo.org/record/6802452/files/Task255_TotalSegmentator_part5_ribs_1139subj.zip0 B
50ENV WEIGHTS_ZIP_5=Task255_TotalSegmentator_part5_ribs_1139subj.zip0 B
51RUN /bin/sh -c wget --directory-prefix218.67 MB
52ENV WEIGHTS_URL_6=https://zenodo.org/record/6802052/files/Task256_TotalSegmentator_3mm_1139subj.zip0 B
53ENV WEIGHTS_ZIP_6=Task256_TotalSegmentator_3mm_1139subj.zip0 B
54RUN /bin/sh -c wget --directory-prefix219.02 MB
55ENV TOTALSEG_WEIGHTS_PATH=/app/totalsegmentator/nnunet/results/0 B
56RUN /bin/sh -c chmod -R1.3 GB
57WORKDIR /app32 B
58CMD ["./docker-entrypoint.sh"]0 B

Command

ADD file:5aaace706aa00ff97d243daa2c29f5de88f124e1b97c570634f16eef90783286 in /