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maxulysse/vepgrch38:2.0.0

Manifest digest

sha256:38ade3591415cd7a49b5e766a6485b1328bdf362eebacf518b3f5918f0892eb5

OS/ARCH

linux/amd64

Compressed size

7.33 GB

Last pushed

over 8 years by maxulysse

Type

Image

Manifest digest

sha256:38ade3591415cd7a49b5e766a6485b1328bdf362eebacf518b3f5918f0892eb5

Image Layers

Image Layers

1ADD file ... in / 40.97 MB
2/bin/sh -c set -xe &&847 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*620 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'854 B
5/bin/sh -c mkdir -p /run/systemd169 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update &&175.42 MB
8/bin/sh -c cpanm DBI DBD::mysql4.34 MB
9/bin/sh -c useradd -r -m4.38 KB
10/bin/sh -c usermod -a -G751 B
11USER [vep]0 B
12ENV HOME=/home/vep0 B
13WORKDIR /home/vep0 B
14/bin/sh -c mkdir -p src136 B
15WORKDIR /home/vep/src0 B
16/bin/sh -c git clone https://github.com/Ensembl/ensembl.git61.52 MB
17/bin/sh -c git clone https://github.com/Ensembl/ensembl-vep.git110.43 MB
18WORKDIR /home/vep/src0 B
19/bin/sh -c ensembl-vep/travisci/get_dependencies.sh185.36 MB
20ENV PERL5LIB=:/home/vep/src/bioperl-live-release-1-6-9240 B
21ENV KENT_SRC=/home/vep/src/kent-335_base/src0 B
22ENV HTSLIB_DIR=/home/vep/src/htslib0 B
23ENV MACHTYPE=x86_640 B
24ENV CFLAGS=-fPIC0 B
25ENV DEPS=/home/vep/src0 B
26USER [root]0 B
27/bin/sh -c ensembl-vep/travisci/build_c.sh17.65 MB
28WORKDIR /home/vep/src/htslib0 B
29/bin/sh -c make install4.27 MB
30WORKDIR /home/vep/src0 B
31/bin/sh -c git clone https://github.com/bioperl/bioperl-ext.git1.23 MB
32WORKDIR /home/vep/src/bioperl-ext/Bio/Ext/Align0 B
33/bin/sh -c perl -pi -e"s|(cd691 B
34/bin/sh -c perl Makefile.PL8.57 KB
35/bin/sh -c make804.55 KB
36/bin/sh -c make install321.98 KB
37WORKDIR /home/vep/src0 B
38/bin/sh -c cpanm --installdeps --with-recommends12.28 MB
39/bin/sh -c cpanm --installdeps --with-recommends6.07 MB
40USER [vep]0 B
41/bin/sh -c echo >> $HOME/.profile560 B
42ENV PATH=/home/vep/src/ensembl-vep:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
43WORKDIR /home/vep/src/ensembl-vep0 B
44/bin/sh -c chmod u+x *.pl19.76 KB
45/bin/sh -c ./INSTALL.pl -a a14.98 MB
46LABEL author=Maxime Garcia description=VEP0 B
47ENV GENOME=GRCh38 VEP_VERSION=910 B
48/bin/sh -c mkdir -p $HOME/.vep6.71 GB

Command

ADD file:c753df38640ab6e246d9e66f0cef7156b7003976080b1e0b83e5717cd6ef1725 in /