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lindenb/jvarkit:1b2aedf24

Manifest digest

sha256:05eb3fdce9399c11981969fa236d01aa51b500dd5b2081ab2e68a4c702c99bfc

OS/ARCH

linux/amd64

Compressed size

1.03 GB

Last pushed

about 3 years by lindenb

Type

Image

Manifest digest

sha256:05eb3fdce9399c11981969fa236d01aa51b500dd5b2081ab2e68a4c702c99bfc

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.16 MB
6CMD ["/bin/bash"]0 B
7LABEL about.summary== Jvarkit: java utilities0 B
8LABEL about.home== https://github.com/lindenb/jvarkit0 B
9LABEL about.documentation== https://jvarkit.readthedocs.io/en/latest/0 B
10LABEL about.tag== Bioinformatics,NGS,Genomics,BAM,VCF0 B
11MAINTAINER Pierre Lindenbaum PhD Institut-du-Thorax0 B
12ARG JVARKIT_VERSION=1b2aedf240 B
13ARG HTS_VERSION=1.170 B
14ARG BEDTOOLS_VERSION=2.30.00 B
15ARG BWA_VERSION=139f68fc4c374781370 B
16ARG PICARD_VERSION=2.27.50 B
17ARG DEBIAN_FRONTEND=noninteractive0 B
18RUN |6 JVARKIT_VERSION=1b2aedf24 HTS_VERSION=1.17 BEDTOOLS_VERSION=2.30.01 GB
19RUN |6 JVARKIT_VERSION=1b2aedf24 HTS_VERSION=1.17 BEDTOOLS_VERSION=2.30.0335 B
20ENV JVARKIT_DIST=/opt/jvarkit/dist0 B
21ENV JVARKIT_JAR=/opt/jvarkit/dist/jvarkit.jar0 B
22ENV PICARD_JAR=/opt/picard/picard.jar0 B
23ENV BCFTOOLS_PLUGINS=/opt/bcftools-1.17/plugins0 B
24ENV LD_LIBRARY_PATH=/opt/htslib-1.17:0 B
25ENV PATH=/opt/bwa:/opt/bedtools2/bin:/opt/htslib-1.17:/opt/bcftools-1.17:/opt/samtools-1.17:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

Command

 ARG RELEASE