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liefeld/nomosek:0.3

Manifest digest

sha256:c3fecf71e3bd90f4ce08ce9fe90c164d58c4ff1f2ff6957991296a817b807d58

OS/ARCH

linux/amd64

Compressed size

941.17 MB

Last pushed

almost 4 years by liefeld

Type

Image

Manifest digest

sha256:c3fecf71e3bd90f4ce08ce9fe90c164d58c4ff1f2ff6957991296a817b807d58

Image Layers

Image Layers

1ADD file ... in / 27.25 MB
2CMD ["bash"]0 B
3ENV DEBIAN_FRONTEND=noninteractive0 B
4RUN /bin/sh -c mkdir /opt/genepatt152 B
5WORKDIR /opt/genepatt0 B
6RUN /bin/sh -c mkdir -p180 B
7COPY requirements/* /opt/genepatt/requirements/ # buildkit386 B
8RUN /bin/sh -c mkdir -p178 B
9RUN /bin/sh -c apt-get update25.85 MB
10RUN /bin/sh -c apt-get install46.06 MB
11RUN /bin/sh -c add-apt-repository universe92 B
12RUN /bin/sh -c apt-get install7.15 MB
13ADD https://bootstrap.pypa.io/pip/2.7/get-pip.py /opt/genepatt/programs # buildkit1.45 MB
14RUN /bin/sh -c python2 /opt/genepatt/programs/get-pip.py5.6 MB
15RUN /bin/sh -c pip2 --version0 B
16RUN /bin/sh -c apt-get update179.14 KB
17RUN /bin/sh -c apt-get install116.62 MB
18RUN /bin/sh -c apt-get install51.94 MB
19RUN /bin/sh -c pip2 install137.93 MB
20RUN /bin/sh -c pip2 install116.3 KB
21RUN /bin/sh -c fc-cache -f7.97 KB
22RUN /bin/sh -c apt-get install4.11 MB
23RUN /bin/sh -c pip3 install5.28 MB
24RUN /bin/sh -c pip3 install257.55 MB
25RUN /bin/sh -c apt-get install779.07 KB
26RUN /bin/sh -c apt-get install129.78 MB
27RUN /bin/sh -c Rscript -e458.67 KB
28RUN /bin/sh -c cnvkit.py version2.13 KB
29RUN /bin/sh -c cd /opt/genepatt/programs35.85 MB
30RUN /bin/sh -c cd /opt/genepatt/programs37.3 MB
31ADD mosek.lic /opt/genepatt/programs/mosek/8/licenses/mosek.lic # buildkit993 B
32RUN /bin/sh -c mkdir -p179 B
33RUN /bin/sh -c mkdir -p177 B
34RUN /bin/sh -c mkdir -p0 B
35RUN /bin/sh -c mkdir -p182 B
36RUN /bin/sh -c echo export1.56 KB
37RUN /bin/sh -c export MOSEKPLATFORM=linux64x860 B
38RUN /bin/sh -c echo export1.61 KB
39RUN /bin/sh -c echo export1.63 KB
40RUN /bin/sh -c echo export1.65 KB
41RUN /bin/sh -c cd /opt/genepatt/programs/mosek/8/tools/platform/linux64x86/python/2/929.02 KB
42RUN /bin/sh -c echo export1.67 KB
43RUN /bin/sh -c echo export1.7 KB
44RUN /bin/sh -c echo export1.71 KB
45COPY src/* /opt/genepatt/programs # buildkit19.2 MB
46RUN /bin/sh -c cd /opt/genepatt/programs21.06 MB
47RUN /bin/sh -c echo export1.73 KB
48RUN /bin/sh -c cp /opt/genepatt/programs/AmpliconSuite-pipeline-master/docker/paa_default_ncm.conf304 B
49RUN /bin/sh -c cp `which393 B
50RUN /bin/sh -c mkdir -p179 B
51COPY testdata /opt/genepatt/testdata/ # buildkit8.73 MB
52COPY run_aa.py /opt/genepatt # buildkit2.31 KB
53COPY download_ref.sh /opt/genepatt # buildkit964 B
54COPY run_aa_v2.sh /opt/genepatt # buildkit1.28 KB
55RUN /bin/sh -c rm 252 B
56COPY run_aa.py /opt/genepatt/run_aa.py # buildkit2.49 KB

Command

ADD file:8faed18d471598732aa3816c8f70e227f16f4de5db6c5c32812a09141048f56d in /