kapsakcj/pangolin:4.1.1-pdata-1.11

Manifest digest

sha256:84f4ead4e4a01482511e4992505030ed54a9bc522769baa613760ee6c552d5ca

OS/ARCH

linux/amd64

Compressed size

931.28 MB

Last pushed

about 4 years by kapsakcj

Type

Image

Manifest digest

sha256:84f4ead4e4a01482511e4992505030ed54a9bc522769baa613760ee6c552d5ca

Image Layers

Image Layers

1ADD file ... in / 29.93 MB

2CMD ["bash"]0 B

3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

4ENV ENV_NAME=base0 B

5ENV MAMBA_ROOT_PREFIX=/opt/conda0 B

6ENV MAMBA_EXE=/bin/micromamba0 B

7COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit112.53 KB

8COPY /tmp/bin/micromamba /bin/micromamba # buildkit6.44 MB

9ARG MAMBA_USER=mambauser0 B

10ARG MAMBA_USER_ID=10000 B

11ARG MAMBA_USER_GID=10000 B

12ENV MAMBA_USER=mambauser0 B

13RUN |3 MAMBA_USER=mambauser MAMBA_USER_ID=1000 MAMBA_USER_GID=10004.48 KB

14USER mambauser0 B

15WORKDIR /tmp32 B

16COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit689 B

17COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit442 B

18ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B

19CMD ["/bin/bash"]0 B

20COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit350 B

21SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B

22/usr/local/bin/_dockerfile_shell.sh #(nop) USER root0 B

23/usr/local/bin/_dockerfile_shell.sh #(nop) WORKDIR /0 B

24/usr/local/bin/_dockerfile_shell.sh #(nop) ARG PANGOLIN_VER=v4.1.10 B

25/usr/local/bin/_dockerfile_shell.sh #(nop) ARG PANGOLIN_DATA_VER=v1.110 B

26/usr/local/bin/_dockerfile_shell.sh #(nop) ARG SCORPIO_VER=v0.3.170 B

27/usr/local/bin/_dockerfile_shell.sh #(nop) ARG CONSTELLATIONS_VER=v0.1.100 B

28/usr/local/bin/_dockerfile_shell.sh #(nop) ARG USHER_VER=0.5.60 B

29/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL base.image=mambaorg/micromamba:0.24.00 B

30/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL dockerfile.version=10 B

31/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL software=pangolin0 B

32/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL software.version=v4.1.10 B

33/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL description=Conda0 B

34/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL website=https://github.com/cov-lineages/pangolin0 B

35/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL license=GNU0 B

36

/usr/local/bin/_dockerfile_shell.sh #(nop)  LABEL license.url=https://github.com/cov-lineages/pangolin/blob/master/LICENSE.txt

0 B

37/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL maintainer1=Curtis0 B

38/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL [email protected]0 B

39|5 CONSTELLATIONS_VER=v0.1.10 PANGOLIN_DATA_VER=v1.11 PANGOLIN_VER=v4.1.1 SCORPIO_VER=v0.3.1725.28 MB

40|5 CONSTELLATIONS_VER=v0.1.10 PANGOLIN_DATA_VER=v1.11 PANGOLIN_VER=v4.1.1 SCORPIO_VER=v0.3.17203.82 KB

41/usr/local/bin/_dockerfile_shell.sh #(nop) ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

42|5 CONSTELLATIONS_VER=v0.1.10 PANGOLIN_DATA_VER=v1.11 PANGOLIN_VER=v4.1.1 SCORPIO_VER=v0.3.17503.33 MB

43/usr/local/bin/_dockerfile_shell.sh #(nop) ENV ENV_NAME=pangolin0 B

44/usr/local/bin/_dockerfile_shell.sh #(nop) ARG MAMBA_DOCKERFILE_ACTIVATE=10 B

45/usr/local/bin/_dockerfile_shell.sh #(nop) WORKDIR /pangolin0 B

46|6 CONSTELLATIONS_VER=v0.1.10 MAMBA_DOCKERFILE_ACTIVATE=1 PANGOLIN_DATA_VER=v1.11 PANGOLIN_VER=v4.1.1365.98 MB

47/usr/local/bin/_dockerfile_shell.sh #(nop) WORKDIR /data0 B

48

/usr/local/bin/_dockerfile_shell.sh #(nop)  ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/envs/pangolin/bin/

0 B

49/usr/local/bin/_dockerfile_shell.sh #(nop) ENV ENV_NAME=pangolin0 B

50/usr/local/bin/_dockerfile_shell.sh #(nop) ARG MAMBA_DOCKERFILE_ACTIVATE=10 B

51|1 MAMBA_DOCKERFILE_ACTIVATE=1 /usr/local/bin/_dockerfile_shell.sh pangolin /pangolin/pangolin/test/test_seqs.fasta745 B

52|1 MAMBA_DOCKERFILE_ACTIVATE=1 /usr/local/bin/_dockerfile_shell.sh pangolin --use-assignment-cache691 B

53/usr/local/bin/_dockerfile_shell.sh #(nop) ADD 4813e3f2acfe2c2376df24837317df59fd9f938d5b83e39115c4c7c26a3c7a7d in8.99 KB

54|1 MAMBA_DOCKERFILE_ACTIVATE=1 /usr/local/bin/_dockerfile_shell.sh pangolin /test-data/SRR13957123.consensus.fa500 B

Command

ADD file:134f25aec8adf83cb940ba073a3409ca85dbb5ae592b704f95193e7d2539a3bc in /