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jonnsmith/gatk_test_builds:2019-03-08-4.0.8.1-SNAPSHOT

Manifest digest

sha256:2758d0d29bf75b949ebfe18c7e00220c6ba730249aef6b6adc2a6116a09bb080

OS/ARCH

linux/amd64

Compressed size

1.35 GB

Last pushed

over 7 years by jonnsmith

Type

Image

Manifest digest

sha256:2758d0d29bf75b949ebfe18c7e00220c6ba730249aef6b6adc2a6116a09bb080

Image Layers

Image Layers

1ADD file ... in / 41.19 MB
2/bin/sh -c set -xe &&851 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*618 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'851 B
5/bin/sh -c mkdir -p /run/systemd169 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update &&0 B
8/bin/sh -c export CLOUD_SDK_REPO="cloud-sdk-$(lsb_release -c0 B
9ENV HOME=/root0 B
10WORKDIR /root0 B
11CMD ["bash"]0 B
12ENV JAVA_LIBRARY_PATH=/usr/lib/jni0 B
13ENV JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64/0 B
14/bin/sh -c java -version0 B
15/bin/sh -c apt-key adv --keyserver0 B
16COPY file:6f0cac7e359f8e34dd5daf3abb6d5c2f441e483be93197923cb842c5ffbe72dc in install_R_packages.R 0 B
17/bin/sh -c Rscript install_R_packages.R0 B
18/bin/sh -c rm -rf /var/lib/apt/lists/*0 B
19348.12 MB
20ARG ZIPPATH0 B
21ADD dir:60700617ec8fe9f5f59d75fda884bf26d34517274bb99c0cdf87c4b6ba5720a9 in /gatk 393.24 MB
22WORKDIR /gatk0 B
23|1 ZIPPATH=./unzippedJar /bin/sh -c ln161 B
24|1 ZIPPATH=./unzippedJar /bin/sh -c ln162 B
25|1 ZIPPATH=./unzippedJar /bin/sh -c ln161 B
26WORKDIR /root0 B
27|1 ZIPPATH=./unzippedJar /bin/sh -c java134 B
28|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir108 B
29|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir93 B
30|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir120 B
31WORKDIR /gatk0 B
32ENV CI=true0 B
33|1 ZIPPATH=./unzippedJar /bin/sh -c echo423 B
34WORKDIR /root0 B
35|1 ZIPPATH=./unzippedJar /bin/sh -c cp423 B
36|1 ZIPPATH=./unzippedJar /bin/sh -c cp160 B
37|1 ZIPPATH=./unzippedJar /bin/sh -c cp884 B
38ENV DOWNLOAD_DIR=/downloads0 B
39ENV CONDA_URL=https://repo.continuum.io/miniconda/Miniconda3-4.3.30-Linux-x86_64.sh0 B
40ENV CONDA_MD5== 0b80a152332a4ce5250f3c09589c7a810 B
41ENV CONDA_PATH=/opt/miniconda0 B
42|1 ZIPPATH=./unzippedJar /bin/sh -c mkdir129.48 MB
43WORKDIR /gatk0 B
44ENV PATH=/opt/miniconda/envs/gatk/bin:/opt/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
45|1 ZIPPATH=./unzippedJar /bin/sh -c conda474.37 MB
46CMD ["bash" "--init-file" "/gatk/gatkenv.rc"]0 B
47ENV PATH=/gatk:/opt/miniconda/envs/gatk/bin:/opt/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

Command

ADD file:7b8419bb9079c6d91ceeb2d0f35c46bcb8083d9d666eb21fda765ed755a07840 in /