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inodb/genome-nexus-vep:latest

Manifest digest

sha256:81f3b5008b4afad85702376519cf1ab512072aa5db2bd3599fdbfc6d8d0e7e70

OS/ARCH

linux/amd64

Compressed size

746.3 MB

Last pushed

over 8 years by inodb

Type

Image

Manifest digest

sha256:81f3b5008b4afad85702376519cf1ab512072aa5db2bd3599fdbfc6d8d0e7e70

Image Layers

Image Layers

1ADD file ... in / 40.88 MB
2/bin/sh -c set -xe &&846 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*620 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'854 B
5/bin/sh -c mkdir -p /run/systemd171 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update &&175.64 MB
8/bin/sh -c cpanm DBI DBD::mysql4.33 MB
9/bin/sh -c useradd -r -m4.37 KB
10/bin/sh -c usermod -a -G752 B
11USER [vep]0 B
12ENV HOME=/home/vep0 B
13WORKDIR /home/vep0 B
14/bin/sh -c mkdir -p src136 B
15WORKDIR /home/vep/src0 B
16/bin/sh -c git clone https://github.com/Ensembl/ensembl.git61.01 MB
17/bin/sh -c git clone https://github.com/Ensembl/ensembl-vep.git109.9 MB
18WORKDIR /home/vep/src0 B
19/bin/sh -c ensembl-vep/travisci/get_dependencies.sh185.35 MB
20ENV PERL5LIB=:/home/vep/src/bioperl-live-release-1-6-9240 B
21ENV KENT_SRC=/home/vep/src/kent-335_base/src0 B
22ENV HTSLIB_DIR=/home/vep/src/htslib0 B
23ENV MACHTYPE=x86_640 B
24ENV CFLAGS=-fPIC0 B
25ENV DEPS=/home/vep/src0 B
26USER [root]0 B
27/bin/sh -c ensembl-vep/travisci/build_c.sh17.64 MB
28WORKDIR /home/vep/src/htslib0 B
29/bin/sh -c make install4.27 MB
30WORKDIR /home/vep/src0 B
31/bin/sh -c git clone https://github.com/bioperl/bioperl-ext.git1.23 MB
32WORKDIR /home/vep/src/bioperl-ext/Bio/Ext/Align0 B
33/bin/sh -c perl -pi -e"s|(cd693 B
34/bin/sh -c perl Makefile.PL8.57 KB
35/bin/sh -c make804.54 KB
36/bin/sh -c make install321.98 KB
37WORKDIR /home/vep/src0 B
38/bin/sh -c cpanm --installdeps --with-recommends12.18 MB
39/bin/sh -c cpanm --installdeps --with-recommends6.07 MB
40USER [vep]0 B
41/bin/sh -c echo >> $HOME/.profile560 B
42ENV PATH=/home/vep/src/ensembl-vep:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
43WORKDIR /home/vep/src/ensembl-vep0 B
44/bin/sh -c chmod u+x *.pl19.75 KB
45/bin/sh -c ./INSTALL.pl -a a14.98 MB
46USER root0 B
47/bin/sh -c apt-get update &&90.9 MB
48USER vep0 B
49COPY file:c9eebd9293605a75009162e8bd41e2440ece1aaed7f5bc35451e46c2a3f37429 in /home/vep/src/ensembl-vep/vep_wrapper.jar 20.8 MB
50CMD ["java" "-jar" "vep_wrapper.jar"]0 B

Command

ADD file:a3344b835ea6fdc5692df23826c970403656c6947342e117b2ac1a05956679af in /