immcantation/suite:4.3.0

Machine learning & AI

Data science

Manifest digest

sha256:5c58cbe6511a2779ba69fc522a175b892aca3b0d10e0deed1fdb81670e581a7d

OS/ARCH

linux/amd64

Compressed size

1.23 GB

Last pushed

almost 5 years by immcantation

Type

Image

Manifest digest

sha256:5c58cbe6511a2779ba69fc522a175b892aca3b0d10e0deed1fdb81670e581a7d

Image Layers

Image Layers

1LABEL maintainer=Clement Verna <[email protected]>0 B

2ENV DISTTAG=f33container FGC=f33 FBR=f330 B

3ADD file ... in / 59.06 MB

4CMD ["/bin/bash"]0 B

5LABEL maintainer=Jason Anthony Vander Heiden0 B

6VOLUME [/data]0 B

7VOLUME [/scratch]0 B

8VOLUME [/software]0 B

9VOLUME [/oasis]0 B

10COPY tools/versions.py /usr/local/bin/versions # buildkit3.04 KB

11COPY tools/builds.py /usr/local/bin/builds # buildkit1.42 KB

12COPY tools/pipelines.py /usr/local/bin/pipelines # buildkit1.26 KB

13COPY tools/rinstall.R /usr/local/bin/rinstall # buildkit676 B

14RUN /bin/sh -c (cd /etc/yum.repos.d;1000 B

15RUN /bin/sh -c dnf -y672.54 MB

16ENV LD_LIBRARY_PATH=/usr/lib64/R/lib:/usr/lib64/atlas0 B

17ARG R_REPO=http://lib.stat.cmu.edu/R/CRAN/0 B

18ARG R_DEPS=c('Rcpp', 0 B

19ARG R_BIOC_DEPS=c('Biostrings', 0 B

20RUN |3 R_REPO=http://lib.stat.cmu.edu/R/CRAN/ R_DEPS=c('Rcpp', 143.16 MB

21LABEL maintainer=Jason Anthony Vander Heiden0 B

22COPY Version.yaml /Version.yaml # buildkit326 B

23COPY Pipeline.yaml /Pipeline.yaml # buildkit407 B

24RUN /bin/sh -c builds write134 B

25RUN /bin/sh -c PACKAGE="immcantation" 26.95 KB

26RUN /bin/sh -c MUSCLE=$(versions get578.74 KB

27RUN /bin/sh -c VSEARCH=$(versions get650.75 KB

28RUN /bin/sh -c CDHIT=$(versions get432.08 KB

29RUN /bin/sh -c BLAST=$(versions get239.38 MB

30RUN /bin/sh -c IGBLAST=$(versions get52.68 MB

31RUN /bin/sh -c PHYLIP=$(versions get4.32 MB

32RUN /bin/sh -c wget -q5.25 MB

33RUN /bin/sh -c AIRR_PY=$(versions get10.69 MB

34RUN /bin/sh -c PACKAGE="presto" 127.48 KB

35RUN /bin/sh -c PACKAGE="changeo" 176.85 KB

36RUN /bin/sh -c PACKAGE="alakazam" 24.05 MB

37RUN /bin/sh -c PACKAGE="shazam" 3.75 MB

38RUN /bin/sh -c PACKAGE="tigger" 5.42 MB

39RUN /bin/sh -c PACKAGE="scoper" 3.6 MB

40RUN /bin/sh -c PACKAGE="dowser" 5.67 MB

41RUN /bin/sh -c PACKAGE="prestor" 1.74 MB

42RUN /bin/sh -c IGPHYML=$(versions get7.12 MB

43RUN /bin/sh -c PACKAGE="rdi" 1.39 MB

44RUN /bin/sh -c RABHIT=$(versions get18.25 MB

45RUN /bin/sh -c fetch_imgtdb.sh -o1.1 MB

46ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/share/igphyml/src0 B

47RUN /bin/sh -c useradd magus2.61 KB

48CMD ["/bin/sh" "-c" "echo -e0 B

Command

 LABEL maintainer=Clement Verna <[email protected]>