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google/deepvariant:pangenome_aware_deepvariant-1.10.0-gpu

Integration & delivery
Machine learning & AI
Data science
Manifest digest

sha256:1b6888c531a31d6742954a2d5556c2a2369532cb83aece158b5103a0b5bacf78

OS/ARCH

linux/amd64

Compressed size

13.61 GB

Last pushed

7 months by pichuan

Type

Image

Manifest digest

sha256:1b6888c531a31d6742954a2d5556c2a2369532cb83aece158b5103a0b5bacf78

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 29.04 MB
6CMD ["/bin/bash"]0 B
7ENV NVARCH=x86_640 B
8ENV NVIDIA_REQUIRE_CUDA=cuda>=12.3 brand=tesla,driver>=470,driver<471 brand=unknown,driver>=470,driver<471 brand=nvidia,driver>=470,driver<4710 B
9ENV NV_CUDA_CUDART_VERSION=12.3.101-10 B
10ENV NV_CUDA_COMPAT_PACKAGE=cuda-compat-12-30 B
11ARG TARGETARCH0 B
12LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
13RUN |1 TARGETARCH=amd64 /bin/sh -c4.41 MB
14ENV CUDA_VERSION=12.3.20 B
15RUN |1 TARGETARCH=amd64 /bin/sh -c54.43 MB
16RUN |1 TARGETARCH=amd64 /bin/sh -c185 B
17ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
18ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib640 B
19COPY NGC-DL-CONTAINER-LICENSE / # buildkit6.72 KB
20ENV NVIDIA_VISIBLE_DEVICES=all0 B
21ENV NVIDIA_DRIVER_CAPABILITIES=compute,utility0 B
22ENV NV_CUDA_LIB_VERSION=12.3.2-10 B
23ENV NV_NVTX_VERSION=12.3.101-10 B
24ENV NV_LIBNPP_VERSION=12.2.3.2-10 B
25ENV NV_LIBNPP_PACKAGE=libnpp-12-3=12.2.3.2-10 B
26ENV NV_LIBCUSPARSE_VERSION=12.2.0.103-10 B
27ENV NV_LIBCUBLAS_PACKAGE_NAME=libcublas-12-30 B
28ENV NV_LIBCUBLAS_VERSION=12.3.4.1-10 B
29ENV NV_LIBCUBLAS_PACKAGE=libcublas-12-3=12.3.4.1-10 B
30ENV NV_LIBNCCL_PACKAGE_NAME=libnccl20 B
31ENV NV_LIBNCCL_PACKAGE_VERSION=2.20.3-10 B
32ENV NCCL_VERSION=2.20.3-10 B
33ENV NV_LIBNCCL_PACKAGE=libnccl2=2.20.3-1+cuda12.30 B
34ARG TARGETARCH0 B
35LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
36RUN |1 TARGETARCH=amd64 /bin/sh -c1.2 GB
37RUN |1 TARGETARCH=amd64 /bin/sh -c62.43 KB
38COPY entrypoint.d/ /opt/nvidia/entrypoint.d/ # buildkit1.64 KB
39COPY nvidia_entrypoint.sh /opt/nvidia/ # buildkit1.49 KB
40ENV NVIDIA_PRODUCT_NAME=CUDA0 B
41ENTRYPOINT ["/opt/nvidia/nvidia_entrypoint.sh"]0 B
42ENV NV_CUDA_LIB_VERSION=12.3.2-10 B
43ENV NV_CUDA_CUDART_DEV_VERSION=12.3.101-10 B
44ENV NV_NVML_DEV_VERSION=12.3.101-10 B
45ENV NV_LIBCUSPARSE_DEV_VERSION=12.2.0.103-10 B
46ENV NV_LIBNPP_DEV_VERSION=12.2.3.2-10 B
47ENV NV_LIBNPP_DEV_PACKAGE=libnpp-dev-12-3=12.2.3.2-10 B
48ENV NV_LIBCUBLAS_DEV_VERSION=12.3.4.1-10 B
49ENV NV_LIBCUBLAS_DEV_PACKAGE_NAME=libcublas-dev-12-30 B
50ENV NV_LIBCUBLAS_DEV_PACKAGE=libcublas-dev-12-3=12.3.4.1-10 B
51ENV NV_CUDA_NSIGHT_COMPUTE_VERSION=12.3.2-10 B
52ENV NV_CUDA_NSIGHT_COMPUTE_DEV_PACKAGE=cuda-nsight-compute-12-3=12.3.2-10 B
53ENV NV_NVPROF_VERSION=12.3.101-10 B
54ENV NV_NVPROF_DEV_PACKAGE=cuda-nvprof-12-3=12.3.101-10 B
55ENV NV_LIBNCCL_DEV_PACKAGE_NAME=libnccl-dev0 B
56ENV NV_LIBNCCL_DEV_PACKAGE_VERSION=2.20.3-10 B
57ENV NCCL_VERSION=2.20.3-10 B
58ENV NV_LIBNCCL_DEV_PACKAGE=libnccl-dev=2.20.3-1+cuda12.30 B
59ARG TARGETARCH0 B
60LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
61RUN |1 TARGETARCH=amd64 /bin/sh -c2.39 GB
62RUN |1 TARGETARCH=amd64 /bin/sh -c86.53 KB
63ENV LIBRARY_PATH=/usr/local/cuda/lib64/stubs0 B
64ENV NV_CUDNN_VERSION=9.0.0.3120 B
65ENV NV_CUDNN_PACKAGE_NAME=libcudnn9-cuda-120 B
66ENV NV_CUDNN_PACKAGE=libcudnn9-cuda-12=9.0.0.312-10 B
67ENV NV_CUDNN_PACKAGE_DEV=libcudnn9-dev-cuda-12=9.0.0.312-10 B
68ARG TARGETARCH0 B
69LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
70LABEL com.nvidia.cudnn.version=9.0.0.3120 B
71RUN |1 TARGETARCH=amd64 /bin/sh -c644.01 MB
72ARG DV_GPU_BUILD0 B
73ARG VERSION_DEEPVARIANT0 B
74ARG PYTHON_VERSION0 B
75ARG TF_ENABLE_ONEDNN_OPTS0 B
76ENV DV_GPU_BUILD=10 B
77ENV VERSION_DEEPVARIANT=1.10.00 B
78ENV PYTHON_VERSION=3.100 B
79ENV TF_ENABLE_ONEDNN_OPTS=10 B
80WORKDIR /opt/0 B
81COPY file:9f38cf6d9693083890ceb2ec71f3b0def248ae094f1bd39c68a50f805389e177 in . 21.98 KB
82WORKDIR /opt/deepvariant/bin/166 B
83COPY dir:2f476fcdf965d335086b450d3f93a0fb4c825d79bac950684017402de9bff01d in /opt/conda 237.93 MB
84COPY file:42912294710604ad8b50522c738bf115df683953b627df9b58547b808fba4813 in . 4.79 KB
85COPY file:0c6d574bdce3ec5bcc8ea6850d129a1468ad4a2016893ae0222c48f051bfa430 in . 2.92 KB
86COPY file:06b9f17907bcbcd782e09d88d4474e84fb4139415ec15ed8352f03de21dfd44b in . 9.49 MB
87COPY file:130f454e2cd6278e72dc615cc0cad2033f545f7de6c1ed7c8c4b5f96337d2856 in . 9.41 MB
88COPY file:f2f4b5ff167df23727d46d422d9b615f7f2cefdc2fcc13775f07a3023dacaa78 in . 9.41 MB
89COPY file:79795f3b327b14e52066a9181107ac9ed1cbc26cc72a893ad5a45f13485dbbc9 in . 9.32 MB
90COPY file:534ebd8b6645aee213a7527f2880262e34faaf2e9beaab850903c01ffaed3ecd in . 9.32 MB
91COPY file:66b4e067a81c3388d6f49ad75f0c8d0a4dde5788f56be27587a923cdb55987df in . 135.6 KB
92COPY file:4ff775102e210d519a10d77d93ea6cb6f877071d20bf516e2aed2471310380dc in . 9.23 MB
93COPY file:65e42f5e2ae89e5d6cff9445f349dc1aa14b9b57b3f439cfec68eee6f1277d8e in . 7.67 KB
94/bin/sh -c ./run-prereq.sh8.69 GB
95/bin/sh -c update-alternatives --install /usr/bin/python31.94 KB
96/bin/sh -c BASH_HEADER='#!/bin/bash' && 492 B
97WORKDIR /opt/models/pangenome_aware_deepvariant/wgs196 B
98ADD 63d7b2ec9f8a02b420038ce1cc8b742a1946ea5d6afc1796d375ec7309a7e301 in . 331 B
99ADD 05a817e3046b9a07eace230584fc9ddfff21c7e2bc485884a9ec153cabc2b36a in . 342.01 KB
100ADD e41b5f2895fbcdcbb9032c974e1569dfe792e94bf90b237f2804b55509dfd1a6 in . 517 B
101WORKDIR /opt/models/pangenome_aware_deepvariant/wgs/variables213 B
102ADD d56b97cf47dfca049fb76609f3687dcb6f0cd013dcd40005c0e33fb49bae9954 in . 77.17 MB
103ADD b2676a7837024fdbd17b560a6f69434b1ed0d1026480a4250df722d9c2477df0 in . 5.97 KB
104/bin/sh -c chmod -R +r77.51 MB
105WORKDIR /opt/models/pangenome_aware_deepvariant/wes199 B
106ADD 6299d385dcfdaec4409c2b1a89daac5aa5252d64c2861f600b54d277e2b64277 in . 335 B
107ADD 05a817e3046b9a07eace230584fc9ddfff21c7e2bc485884a9ec153cabc2b36a in . 342.03 KB
108ADD e13792a5131f81db48016a194042677001d21ecfc2c4b560c85bd088058e6498 in . 454 B
109WORKDIR /opt/models/pangenome_aware_deepvariant/wes/variables219 B
110ADD 314294f6e9eaa33c3f7abd5ddc27f32b9f0211e20e2e8d166315e2f47b6d3b39 in . 78.11 MB
111ADD 7107d5055a507bb7d1657c5539da33ec695b199939b1d6d4e300b6c3c07bdce7 in . 5.99 KB
112/bin/sh -c chmod -R +r78.45 MB
113ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/opt/conda/envs/bio/bin:/opt/deepvariant/bin/pangenome_aware_deepvariant:/opt/deepvariant/bin0 B
114ENV TF_USE_LEGACY_KERAS=10 B
115/bin/sh -c apt-get -y update20.58 MB
116WORKDIR /opt/deepvariant0 B
117CMD ["/opt/deepvariant/bin/run_pangenome_aware_deepvariant" "--help"]0 B

Command

 ARG RELEASE