google/deepsomatic:CL763525444-gpu

Manifest digest

sha256:6734f60284c05462879485dea03452d32b73026198473e6482936ed8896e2a27

OS/ARCH

linux/amd64

Compressed size

14.66 GB

Last pushed

over 1 year by pichuan

Type

Image

Manifest digest

sha256:6734f60284c05462879485dea03452d32b73026198473e6482936ed8896e2a27

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 29.03 MB

6CMD ["/bin/bash"]0 B

7ENV NVARCH=x86_640 B

8

ENV NVIDIA_REQUIRE_CUDA=cuda>=11.8 brand=tesla,driver>=470,driver<471 brand=unknown,driver>=470,driver<471 brand=nvidia,driver>=470,driver<471

0 B

9ENV NV_CUDA_CUDART_VERSION=11.8.89-10 B

10ENV NV_CUDA_COMPAT_PACKAGE=cuda-compat-11-80 B

11ARG TARGETARCH0 B

12LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B

13RUN |1 TARGETARCH=amd64 /bin/sh -c4.41 MB

14ENV CUDA_VERSION=11.8.00 B

15RUN |1 TARGETARCH=amd64 /bin/sh -c53.62 MB

16RUN |1 TARGETARCH=amd64 /bin/sh -c188 B

17ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

18ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib640 B

19COPY NGC-DL-CONTAINER-LICENSE / # buildkit6.72 KB

20ENV NVIDIA_VISIBLE_DEVICES=all0 B

21ENV NVIDIA_DRIVER_CAPABILITIES=compute,utility0 B

22ENV NV_CUDA_LIB_VERSION=11.8.0-10 B

23ENV NV_NVTX_VERSION=11.8.86-10 B

24ENV NV_LIBNPP_VERSION=11.8.0.86-10 B

25ENV NV_LIBNPP_PACKAGE=libnpp-11-8=11.8.0.86-10 B

26ENV NV_LIBCUSPARSE_VERSION=11.7.5.86-10 B

27ENV NV_LIBCUBLAS_PACKAGE_NAME=libcublas-11-80 B

28ENV NV_LIBCUBLAS_VERSION=11.11.3.6-10 B

29ENV NV_LIBCUBLAS_PACKAGE=libcublas-11-8=11.11.3.6-10 B

30ENV NV_LIBNCCL_PACKAGE_NAME=libnccl20 B

31ENV NV_LIBNCCL_PACKAGE_VERSION=2.15.5-10 B

32ENV NCCL_VERSION=2.15.5-10 B

33ENV NV_LIBNCCL_PACKAGE=libnccl2=2.15.5-1+cuda11.80 B

34ARG TARGETARCH0 B

35LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B

36RUN |1 TARGETARCH=amd64 /bin/sh -c1.28 GB

37RUN |1 TARGETARCH=amd64 /bin/sh -c62.2 KB

38COPY entrypoint.d/ /opt/nvidia/entrypoint.d/ # buildkit1.65 KB

39COPY nvidia_entrypoint.sh /opt/nvidia/ # buildkit1.49 KB

40ENV NVIDIA_PRODUCT_NAME=CUDA0 B

41ENTRYPOINT ["/opt/nvidia/nvidia_entrypoint.sh"]0 B

42ENV NV_CUDA_LIB_VERSION=11.8.0-10 B

43ENV NV_CUDA_CUDART_DEV_VERSION=11.8.89-10 B

44ENV NV_NVML_DEV_VERSION=11.8.86-10 B

45ENV NV_LIBCUSPARSE_DEV_VERSION=11.7.5.86-10 B

46ENV NV_LIBNPP_DEV_VERSION=11.8.0.86-10 B

47ENV NV_LIBNPP_DEV_PACKAGE=libnpp-dev-11-8=11.8.0.86-10 B

48ENV NV_LIBCUBLAS_DEV_VERSION=11.11.3.6-10 B

49ENV NV_LIBCUBLAS_DEV_PACKAGE_NAME=libcublas-dev-11-80 B

50ENV NV_LIBCUBLAS_DEV_PACKAGE=libcublas-dev-11-8=11.11.3.6-10 B

51ENV NV_CUDA_NSIGHT_COMPUTE_VERSION=11.8.0-10 B

52ENV NV_CUDA_NSIGHT_COMPUTE_DEV_PACKAGE=cuda-nsight-compute-11-8=11.8.0-10 B

53ENV NV_NVPROF_VERSION=11.8.87-10 B

54ENV NV_NVPROF_DEV_PACKAGE=cuda-nvprof-11-8=11.8.87-10 B

55ENV NV_LIBNCCL_DEV_PACKAGE_NAME=libnccl-dev0 B

56ENV NV_LIBNCCL_DEV_PACKAGE_VERSION=2.15.5-10 B

57ENV NCCL_VERSION=2.15.5-10 B

58ENV NV_LIBNCCL_DEV_PACKAGE=libnccl-dev=2.15.5-1+cuda11.80 B

59ARG TARGETARCH0 B

60LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B

61RUN |1 TARGETARCH=amd64 /bin/sh -c2.29 GB

62RUN |1 TARGETARCH=amd64 /bin/sh -c86.16 KB

63ENV LIBRARY_PATH=/usr/local/cuda/lib64/stubs0 B

64ENV NV_CUDNN_VERSION=8.9.6.500 B

65ENV NV_CUDNN_PACKAGE_NAME=libcudnn80 B

66ENV NV_CUDNN_PACKAGE=libcudnn8=8.9.6.50-1+cuda11.80 B

67ENV NV_CUDNN_PACKAGE_DEV=libcudnn8-dev=8.9.6.50-1+cuda11.80 B

68ARG TARGETARCH0 B

69LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B

70LABEL com.nvidia.cudnn.version=8.9.6.500 B

71RUN |1 TARGETARCH=amd64 /bin/sh -c1.34 GB

72ARG DV_GPU_BUILD0 B

73ARG VERSION_DEEPSOMATIC0 B

74ARG PYTHON_VERSION0 B

75ARG TF_ENABLE_ONEDNN_OPTS0 B

76ENV DV_GPU_BUILD=10 B

77ENV VERSION_DEEPSOMATIC=1.9.00 B

78ENV PYTHON_VERSION=3.100 B

79ENV TF_ENABLE_ONEDNN_OPTS=10 B

80WORKDIR /opt/0 B

81COPY file:d91ef01a7de35873d45f11b290069dea255f6e8c9c256e235338218a121eb719 in . 21.98 KB

82WORKDIR /opt/deepvariant/bin/166 B

83COPY dir:007869eddf8b47f84b22767b6af263a259af514f49d13e2fc861746f344ddbb3 in /opt/conda 230.95 MB

84COPY file:4d7071fa8409fc93bb85c4dbc90eae4ece16679b9e2681f168c2a77623becc4a in . 4.62 KB

85COPY file:302e27b40c45efa6eaeb10cbd94081adc73702c088120c4d6623d16bbedfefe6 in . 2.86 KB

86COPY file:632a7afac9424ddd68d408d694281d842c17392041686fe995fff7dc47ce8ec9 in . 9.11 MB

87COPY file:3247e40ba3f15fe0857dc239ff9f41ecc4a0011b5df624f3137463fb0a8754f7 in . 9.03 MB

88COPY file:f9e0bfcc90461dd668ad38c3b14ca0525c4b141e9ac88d6f45365f80d14021af in . 9.01 MB

89COPY file:688a9d731e9f331adf75ba693e38fb935e46e8c821fc5f9076aa38cf11c6f00b in . 8.94 MB

90COPY file:7d1a4b17c72b60a23e15ebcb404da5bd998e950662493d3bf015a2cfb095faec in . 8.94 MB

91COPY file:5161b66463a782ef28ebfdfe7742bd23aa7cc6c10037843e90fae11b26a799f2 in . 133.92 KB

92COPY file:d204300ea312fe9b3dbb216654537dd0f7917b530372c9074da75f177cdd13b5 in ./deepsomatic/ 8.36 KB

93/bin/sh -c ./run-prereq.sh4.55 GB

94/bin/sh -c update-alternatives --install /usr/bin/python31.93 KB

95/bin/sh -c BASH_HEADER='#!/bin/bash' && 453 B

96WORKDIR /opt/models/deepsomatic/wgs183 B

97ADD multi:d55da4f20175b2bf51cceeee54994f7162b2aa6a08029c6eedc56286985044e9 in ./ 342.27 KB

98WORKDIR /opt/models/deepsomatic/wgs/variables207 B

99ADD multi:046acdf451a3fefab82951386a3ac59519a60e1f99de867deacb16a5b69ab4b6 in ./ 76.34 MB

100/bin/sh -c chmod -R +r76.68 MB

101WORKDIR /opt/models/deepsomatic/wes188 B

102ADD multi:362ea27c991f13afa6249ecd458b71a10d0cea84cd2d3715b7780151eae14cc1 in ./ 342.28 KB

103WORKDIR /opt/models/deepsomatic/wes/variables208 B

104ADD multi:f4f760c5714cb21ccb583dfc3b78b1999e7b26159f015153a3ec0de900345039 in ./ 77.58 MB

105/bin/sh -c chmod -R +r77.92 MB

106WORKDIR /opt/models/deepsomatic/pacbio192 B

107ADD multi:5b5926ff20f6e48cfed2b78dfe089b7c082ae68b8ac06f89821a97d7865bf25c in ./ 342.25 KB

108WORKDIR /opt/models/deepsomatic/pacbio/variables213 B

109ADD multi:01527f28a01064763a28f677ac95afed52ab1c197f613ee088ad5671a17ac46e in ./ 77.39 MB

110/bin/sh -c chmod -R +r77.72 MB

111WORKDIR /opt/models/deepsomatic/ont188 B

112ADD multi:01095b99b737fe4757102b8743f70ae5c036fd74bc52fea7b2c06f61ddf98b0c in ./ 342.08 KB

113WORKDIR /opt/models/deepsomatic/ont/variables208 B

114ADD multi:2ca7cc8d4f4ffa82674957d228650ab5a65c60003f117a111860604dd4ec76f3 in ./ 76.12 MB

115/bin/sh -c chmod -R +r76.45 MB

116WORKDIR /opt/models/deepsomatic/ffpe_wgs192 B

117ADD multi:a78fd435a456776b776bb8fd21b6925703db1118444f8ffa346bc45e59984f75 in ./ 342.28 KB

118WORKDIR /opt/models/deepsomatic/ffpe_wgs/variables211 B

119ADD multi:56205e8287297564099ccdb6add85ccf67508fb78c8bee9709100b18660faaa0 in ./ 78.27 MB

120/bin/sh -c chmod -R +r78.61 MB

121WORKDIR /opt/models/deepsomatic/ffpe_wes194 B

122ADD multi:4d52abc18b949b89e95be6a50ef25abf1540e99e89b5380267cb8acc04102aa5 in ./ 342.28 KB

123WORKDIR /opt/models/deepsomatic/ffpe_wes/variables214 B

124ADD multi:fd82e7f12d902d32c2c0a993ae130102250427738923f0db8e41e30352b4b05b in ./ 78.56 MB

125/bin/sh -c chmod -R +r78.9 MB

126WORKDIR /opt/models/deepsomatic/wgs_tumor_only200 B

127ADD multi:9c24a5a32a49e1f77825c6dc29b4fcc7c2c1e40b2039b71182361548242b4c58 in ./ 342.1 KB

128WORKDIR /opt/models/deepsomatic/wgs_tumor_only/variables221 B

129ADD multi:66e6f54ee1c9c14bcdac39cedf57721d31202606eaa5c2e479250bdc8508040c in ./ 77.21 MB

130/bin/sh -c chmod -R +r77.54 MB

131WORKDIR /opt/models/deepsomatic/wes_tumor_only199 B

132ADD multi:52bc6165a139781a29555ca23ca9bb575cb7199f86a8e0eed12149576b7e0e00 in ./ 342.1 KB

133WORKDIR /opt/models/deepsomatic/wes_tumor_only/variables222 B

134ADD multi:d1f3f762b0c7ed5fdcb5a95f54728cf077082a77db73d8baef02d59005471b22 in ./ 76.92 MB

135/bin/sh -c chmod -R +r77.25 MB

136WORKDIR /opt/models/deepsomatic/pacbio_tumor_only201 B

137ADD multi:30fcb9136f8ba168d7be0e3326f4444d1325fdd914c50969048632c4a1da48f1 in ./ 341.72 KB

138WORKDIR /opt/models/deepsomatic/pacbio_tumor_only/variables225 B

139ADD multi:ea2f072767bee687e5d7ca8de224f3794432d681d01f6c54a3ce4bbfb105cbec in ./ 76.37 MB

140/bin/sh -c chmod -R +r76.7 MB

141WORKDIR /opt/models/deepsomatic/ont_tumor_only196 B

142ADD multi:77283580da4628a9e7c3463a810c6fd98777d3532fe2981d704b05f7cadb501a in ./ 341.71 KB

143WORKDIR /opt/models/deepsomatic/ont_tumor_only/variables221 B

144ADD multi:a45f03cf5fc2b16a445dfa8988ed0a7b701150451a83ece679e447328f933798 in ./ 76.59 MB

145/bin/sh -c chmod -R +r76.92 MB

146WORKDIR /opt/models/deepsomatic/ffpe_wgs_tumor_only203 B

147ADD multi:77cdca1170fa47b076c1727aa7cdd56d2d6e41fa378c273a50acf8325a676176 in ./ 342.09 KB

148WORKDIR /opt/models/deepsomatic/ffpe_wgs_tumor_only/variables225 B

149ADD multi:dea8cb25f061a8d18a55503bc97597e8c92ee062bc7261eef5716f04aa1bdf4d in ./ 77.14 MB

150/bin/sh -c chmod -R +r77.48 MB

151WORKDIR /opt/models/deepsomatic/ffpe_wes_tumor_only202 B

152ADD multi:83241daafaa185de87980dcb0de4ec4f16e060327f75df3bcf2db911852525e6 in ./ 342.1 KB

153WORKDIR /opt/models/deepsomatic/ffpe_wes_tumor_only/variables228 B

154ADD multi:e4d6af06e2dfac4a53251c044203c5af2d439fa7c2142de4dbf9cf886fb3d152 in ./ 78.58 MB

155/bin/sh -c chmod -R +r78.92 MB

156WORKDIR /opt/models/deepsomatic/pons191 B

157ADD multi:d2c3e35e8b1ab1cee9ba7092125e6f91a4d5966d18522584c19354a298b1ae03 in ./ 1.51 GB

158/bin/sh -c chmod -R +r1.51 GB

159

ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/opt/conda/envs/bio/bin:/opt/deepvariant/bin/deepsomatic:/opt/deepvariant/bin

0 B

160/bin/sh -c apt-get -y update20.55 MB

161WORKDIR /opt/deepvariant0 B

162CMD ["/opt/deepvariant/bin/deepsomatic/run_deepsomatic" "--help"]0 B

Command

 ARG RELEASE