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genepattern/sc_ssgsea:v0.1

Manifest digest

sha256:261b8ecbda5bfeb8da68c293aecdc2bc28a0c7e7c8530c371e9e64a4d2f88203

OS/ARCH

linux/amd64

Compressed size

2.03 GB

Last pushed

over 1 year by edwin5588

Type

Image

Manifest digest

sha256:261b8ecbda5bfeb8da68c293aecdc2bc28a0c7e7c8530c371e9e64a4d2f88203

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=20.040 B
5ADD file ... in / 26.23 MB
6CMD ["/bin/bash"]0 B
7LABEL org.opencontainers.image.licenses=GPL-2.0-or-later org.opencontainers.image.source=https://github.com/rocker-org/rocker-versioned2 org.opencontainers.image.vendor=Rocker Project0 B
8ENV R_VERSION=4.2.00 B
9ENV R_HOME=/usr/local/lib/R0 B
10ENV TZ=Etc/UTC0 B
11COPY scripts/install_R_source.sh /rocker_scripts/install_R_source.sh # buildkit1.76 KB
12RUN /bin/sh -c /rocker_scripts/install_R_source.sh #238.13 MB
13ENV CRAN=https://packagemanager.posit.co/cran/__linux__/focal/2022-06-220 B
14ENV LANG=en_US.UTF-80 B
15COPY scripts /rocker_scripts # buildkit22.05 KB
16RUN /bin/sh -c /rocker_scripts/setup_R.sh #36.18 MB
17CMD ["R"]0 B
18RUN /bin/sh -c echo "options(repos276 B
19ENV RETICULATE_MINICONDA_ENABLED=FALSE0 B
20RUN /bin/sh -c apt-get update31.4 MB
21RUN /bin/sh -c apt-get install218.55 MB
22RUN /bin/sh -c apt-get install102.7 MB
23RUN /bin/sh -c apt-get install1.48 MB
24RUN /bin/sh -c LLVM_CONFIG=/usr/lib/llvm-10/bin/llvm-config pip384.26 MB
25RUN /bin/sh -c pip3 install35.52 MB
26RUN /bin/sh -c pip3 install114.58 MB
27RUN /bin/sh -c git clone37.06 MB
28RUN /bin/sh -c g++ -std=c++1186.3 KB
29RUN /bin/sh -c R --no-echo483 KB
30RUN /bin/sh -c R --no-echo272.06 MB
31RUN /bin/sh -c R --no-echo147.89 MB
32RUN /bin/sh -c R --no-echo13.97 MB
33RUN /bin/sh -c R --no-echo2.73 MB
34RUN /bin/sh -c R --no-echo5.66 MB
35RUN /bin/sh -c R --no-echo92 B
36RUN /bin/sh -c R --no-echo387.98 KB
37RUN /bin/sh -c R --no-echo74.21 MB
38RUN /bin/sh -c R --no-echo492.15 KB
39CMD ["R"]0 B
40SHELL [/bin/bash -c]0 B
41RUN /bin/bash -c apt-get install667.99 KB
42RUN /bin/bash -c wget https://www.python.org/ftp/python/3.11.9/Python-3.11.9.tgz25.21 MB
43RUN /bin/bash -c tar -xf25.37 MB
44WORKDIR /Python-3.11.90 B
45RUN /bin/bash -c ./configure --enable-optimizations129.06 KB
46RUN /bin/bash -c make -j$(nproc)79.67 MB
47RUN /bin/bash -c make install98.43 MB
48WORKDIR /0 B
49RUN /bin/bash -c rm -r129 B
50RUN /bin/bash -c apt -y385 B
51RUN /bin/bash -c python3 -m9.68 MB
52ARG CACHEBUST=10 B
53RUN |1 CACHEBUST=1 /bin/bash -c8.28 MB
54RUN |1 CACHEBUST=1 /bin/bash -c5.78 MB
55COPY ./ sc_ssGSEA_local # buildkit2.56 MB
56RUN |1 CACHEBUST=1 /bin/bash -c382.49 MB
57COPY run_sc_ssgsea.py / # buildkit649 B
58RUN |1 CACHEBUST=1 /bin/bash -c648 B
59CMD ["/bin/bash && source sc_ssgsea_venv/bin/activate"]0 B

Command

 ARG RELEASE