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genepattern/amplicon-architect:v3.13.0

Manifest digest

sha256:a856d72f21567e5ad500b3ad8d36d1c3ab36103135d886211cbd28969767c2c8

OS/ARCH

linux/amd64

Compressed size

737.98 MB

Last pushed

10 months by genepatterndev

Type

Image

Manifest digest

sha256:a856d72f21567e5ad500b3ad8d36d1c3ab36103135d886211cbd28969767c2c8

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.17 MB
6CMD ["/bin/bash"]0 B
7LABEL title=AmpliconSuite-pipeline description=A quickstart tool0 B
8ARG DEBIAN_FRONTEND=noninteractive0 B
9WORKDIR /home32 B
10RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c434 B
11COPY requirements/requirements.txt /home/requirements/ # buildkit316 B
12COPY internal_docker_script.sh /home/ # buildkit721 B
13RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c194.43 MB
14RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c387.89 MB
15ADD https://github.com/AmpliconSuite/AmpliconArchitect/archive/master.zip /tmp/programs/AmpliconArchitect # buildkit109.42 KB
16ADD https://github.com/AmpliconSuite/AmpliconClassifier/archive/main.zip /tmp/programs/AmpliconClassifier # buildkit1.36 MB
17ADD https://github.com/AmpliconSuite/AmpliconSuite-pipeline/archive/master.zip /tmp/programs/AmpliconSuite # buildkit5.66 MB
18ADD https://github.com/parklab/NGSCheckMate/archive/master.zip /tmp/programs/NGSCheckMate # buildkit18.79 MB
19RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c1.64 KB
20RUN |1 DEBIAN_FRONTEND=noninteractive /bin/sh -c27.78 MB
21ARG set_uid0 B
22ARG set_gid0 B
23RUN |3 DEBIAN_FRONTEND=noninteractive set_uid= set_gid=32 B
24RUN |3 DEBIAN_FRONTEND=noninteractive set_uid= set_gid=24.15 KB
25RUN |3 DEBIAN_FRONTEND=noninteractive set_uid= set_gid=94 B
26USER aa_user0 B
27WORKDIR /home32 B
28USER root0 B
29RUN /bin/sh -c mkdir -p116 B
30RUN /bin/sh -c mkdir -p141 B
31COPY src/run_aa.py /opt/genepatt # buildkit3.92 KB
32COPY src/download_ref.sh /opt/genepatt # buildkit1 KB
33COPY src/sample_metadata_skeleton.json /opt/genepatt # buildkit236 B
34RUN /bin/sh -c mkdir -p156 B
35RUN /bin/sh -c chmod -R4.8 KB
36RUN /bin/sh -c chmod -R144 B
37RUN /bin/sh -c chmod -R27.78 MB
38RUN /bin/sh -c chmod -R2.3 KB
39RUN /bin/sh -c apt-get update45.98 MB

Command

 ARG RELEASE