encodedcc/ptools:dev_78998295-473e-4122-9f25-98d1cb7dfd02

Manifest digest

sha256:3f59488960353b99977d29e2ca0ba66ed8e5e9f74531af1de6b89ef007ffa63e

OS/ARCH

linux/amd64

Compressed size

399.32 MB

Last pushed

almost 6 years by encoderobot

Type

Image

Manifest digest

sha256:3f59488960353b99977d29e2ca0ba66ed8e5e9f74531af1de6b89ef007ffa63e

Image Layers

Image Layers

1ADD file ... in / 27.24 MB

2/bin/sh -c set -xe &&848 B

3/bin/sh -c [ -z "$(apt-get0 B

4/bin/sh -c mkdir -p /run/systemd162 B

5CMD ["/bin/bash"]0 B

6MAINTAINER Otto Jolanki0 B

7/bin/sh -c apt-get update &&272.97 MB

8/bin/sh -c mkdir /software97 B

9WORKDIR /software0 B

10ENV PATH=/software:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

11/bin/sh -c wget https://tukaani.org/xz/xz-5.2.3.tar.gz &&2.85 MB

12/bin/sh -c cd xz-5.2.3 &&3.58 MB

13/bin/sh -c wget https://github.com/broadinstitute/picard/releases/download/2.23.8/picard.jar15.87 MB

14/bin/sh -c chmod 755 picard.jar15.87 MB

15/bin/sh -c git clone --branch2.84 MB

16/bin/sh -c pip3 install numpy==1.19.258.09 MB

17/bin/sh -c mkdir -p 10xscell/pfastq141 B

18COPY dir:f786743521ed4a8c2854a82afc3339f6387689b9968c0b332ad1a300b25d2c46 in 10xscell/pfastq 1.46 KB

19/bin/sh -c mkdir genome119 B

20COPY dir:4fdecfbebea960267ae4de31ea9dbe103a345747f13a6b76a43ec343c3d88710 in genome 3.09 KB

21/bin/sh -c mkdir diff117 B

22COPY dir:82dcc6cdda72f344b9329c3c5226d6311943af1e70e112a2203267bd1415ae55 in diff 1.33 KB

23/bin/sh -c mkdir pbam2bam122 B

24COPY dir:9b7c3bd512f39b72da86fe64f09cb93d7339f54efc159e2a9ad8f370b3432f2d in pbam2bam 4.08 KB

25/bin/sh -c mkdir transcriptome122 B

26COPY dir:78c517e708b87cba358f373a7d154d1c97d1a3d64d999872f14726b32afd8767 in transcriptome 2.78 KB

27

ENV PATH=/software/transcriptome:/software/pbam2bam:/software/diff:/software/genome:/software/10xscell/pfastq:/software:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

Command

ADD file:da80f59399481ffc32f84353830dcf598f31a97785222e75d643bfb8a9aa14e7 in /