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encodedcc/mirna-seq-pipeline:PIP-1635-docker-image-input_ab8aadaa-e09d-4e19-847a-2f5d6520cd11

Manifest digest

sha256:f26f4134d399a9df88cd8ff952550b8daaaa5df45f57543105f49b164d6a2ecd

OS/ARCH

linux/amd64

Compressed size

323.5 MB

Last pushed

almost 5 years by encoderobot

Type

Image

Manifest digest

sha256:f26f4134d399a9df88cd8ff952550b8daaaa5df45f57543105f49b164d6a2ecd

Image Layers

Image Layers

1ADD file ... in / 27.25 MB
2CMD ["bash"]0 B
3MAINTAINER Otto Jolanki0 B
4/bin/sh -c apt-get update &&136.63 MB
5/bin/sh -c mkdir /software129 B
6WORKDIR /software0 B
7ENV PATH=/software:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
8/bin/sh -c wget http://zlib.net/zlib-1.2.11.tar.gz &&1.19 MB
9/bin/sh -c cd zlib-1.2.11 &&606.19 KB
10/bin/sh -c wget https://tukaani.org/xz/xz-5.2.3.tar.gz &&2.85 MB
11/bin/sh -c cd xz-5.2.3 &&3.58 MB
12/bin/sh -c wget https://github.com/alexdobin/STAR/archive/2.5.1b.tar.gz &&22.75 MB
13/bin/sh -c cd STAR-2.5.1b &&3.61 MB
14ENV PATH=/software/STAR-2.5.1b/bin/Linux_x86_64:/software:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
15/bin/sh -c wget http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/wigToBigWig &&2.19 MB
16/bin/sh -c pip3 install cutadapt==3.42.7 MB
17/bin/sh -c git clone --branch2.32 MB
18/bin/sh -c pip3 install qc-utils==0.1.120.57 KB
19/bin/sh -c pip3 install pandas==1.3.2117.81 MB
20/bin/sh -c mkdir -p mirna-seq-pipeline/src178 B
21COPY dir:e49501c2cec05a60baf8d2add455ae814ddd14b0e1115f9d5c5cfdbb6e950de0 in mirna-seq-pipeline/src 3.63 KB
22ENV PATH=/software/mirna-seq-pipeline/src:/software/STAR-2.5.1b/bin/Linux_x86_64:/software:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
23/bin/sh -c echo "make sure0 B

Command

ADD file:d2abf27fe2e8b0b5f4da68c018560c73e11c53098329246e3e6fe176698ef941 in /