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ebelter/mgi:bulk-rna

Manifest digest

sha256:45323033bd1f5eb0207c233943521b65632ccd4fedb6b4c75bb340f6e45ff274

OS/ARCH

linux/amd64

Compressed size

643.6 MB

Last pushed

about 4 years by ebelter

Type

Image

Manifest digest

sha256:45323033bd1f5eb0207c233943521b65632ccd4fedb6b4c75bb340f6e45ff274

Image Layers

Image Layers

1ADD file ... in / 25.45 MB
2/bin/sh -c [ -z "$(apt-get34.53 KB
3/bin/sh -c set -xe &&854 B
4/bin/sh -c mkdir -p /run/systemd163 B
5CMD ["/bin/bash"]0 B
6LABEL MAINTAINER=Eddie Belter0 B
7/bin/sh -c apt-get update &&381.29 MB
8ENV PATH=/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
9WORKDIR /apps132 B
10/bin/sh -c wget http://zlib.net/zlib-1.2.12.tar.gz &&2.88 MB
11/bin/sh -c cd zlib-1.2.12 &&689.54 KB
12WORKDIR /apps0 B
13/bin/sh -c wget https://tukaani.org/xz/xz-5.2.3.tar.gz &&2.85 MB
14/bin/sh -c cd xz-5.2.3 &&3.02 MB
15ARG SAMTOOLS_VERSION=1.160 B
16WORKDIR /apps0 B
17|1 SAMTOOLS_VERSION=1.16 /bin/sh -c wget9.18 MB
18WORKDIR /apps/samtools-1.160 B
19|1 SAMTOOLS_VERSION=1.16 /bin/sh -c make23.68 MB
20WORKDIR /apps/samtools-1.16/htslib-1.160 B
21|1 SAMTOOLS_VERSION=1.16 /bin/sh -c make46.84 MB
22WORKDIR /apps0 B
23|1 SAMTOOLS_VERSION=1.16 /bin/sh -c rm142 B
24WORKDIR /apps0 B
25ARG STAR_VERSION=2.7.9a0 B
26|2 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh -c20.48 MB
27|2 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh -c4.23 MB
28ENV PATH=/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
29WORKDIR /apps0 B
30ARG KALLISTO_VERSION=0.44.00 B
31|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh6.45 MB
32ENV PATH=/apps/kallisto_linux-v0.44.0:/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
33WORKDIR /apps0 B
34|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh9.75 MB
35|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh8.7 MB
36|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh11.58 MB
37ENV PATH=/apps/RSEM-1.2.31:/apps/kallisto_linux-v0.44.0:/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
38WORKDIR /apps0 B
39|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh8.71 MB
40ENV PATH=/apps/RSEM-1.2.31:/apps/kallisto_linux-v0.44.0:/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/apps/kentutils_v385_bin_bulkrna/0 B
41|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh77.77 MB
42WORKDIR /apps/scripts153 B
43COPY multi:34f4b03b791335a75adf8728fffaa3d8df8839336ed2d044c1a0893b90deaf47 in ./ 15.09 KB
44|3 KALLISTO_VERSION=0.44.0 SAMTOOLS_VERSION=1.16 STAR_VERSION=2.7.9a /bin/sh15.04 KB
45ENV PATH=/apps/scripts/:/apps/RSEM-1.2.31:/apps/kallisto_linux-v0.44.0:/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/apps/kentutils_v385_bin_bulkrna/0 B
46WORKDIR /0 B

Command

ADD file:53f100793e6c0adfca99977a42bb65cb7971c26e4d6e4499d1c30a1f51f06854 in /