ctomlins/cramify_master:latest

Multi-platform

Index digest

sha256:8d4a10e31dd8422e47c57d36f4b94749a6489e2f762ead8b7d5e9b538ba9cc66

OS/ARCH

Compressed size

296.82 MB

Last pushed

6 months by ctomlins

Type

Image

Manifest digest

sha256:3e54b322ef635af64d959da6b4ac5f89a155935d8ed4d737d38412daf9316364

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=20.040 B

5ADD file ... in / 26.24 MB

6CMD ["/bin/bash"]0 B

7LABEL maintainer=Chad Tomlinson <[email protected]> description=Ubuntu0 B

8ENV DEBIAN_FRONTEND=noninteractive LC_ALL=C.UTF-8 LANG=C.UTF-80 B

9ARG HTSLIB_VER=1.23.10 B

10ARG SAMTOOLS_VER=1.23.10 B

11ARG BCFTOOLS_VER=1.23.10 B

12ARG HTSLIB_URL=https://github.com/samtools/htslib/releases/download/1.23.1/htslib-1.23.1.tar.bz20 B

13ARG SAMTOOLS_URL=https://github.com/samtools/samtools/releases/download/1.23.1/samtools-1.23.1.tar.bz20 B

14ARG BCFTOOLS_URL=https://github.com/samtools/bcftools/releases/download/1.23.1/bcftools-1.23.1.tar.bz20 B

15RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.1121.93 MB

16WORKDIR /tmp/build118 B

17RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.194.03 MB

18RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.126.91 MB

19RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.127.7 MB

20RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.15.05 KB

21RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.132 B

22RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.132 B

23WORKDIR /work94 B

24COPY cramify_one.sh /usr/local/bin/cramify_one.sh # buildkit2.3 KB

25COPY run_one_hifi_bam_metrics.sh /usr/local/bin/run_one_hifi_bam_metrics.sh # buildkit1.69 KB

26COPY reduce_hifi_platform_metrics.sh /usr/local/bin/reduce_hifi_platform_metrics.sh # buildkit1.63 KB

27RUN |6 HTSLIB_VER=1.23.1 SAMTOOLS_VER=1.23.1 BCFTOOLS_VER=1.23.11.68 KB

28ENV UMASK=00020 B

29CMD ["/bin/bash"]0 B

Command

 ARG RELEASE