Sign inSign up

chrisamiller/pvactools:3.0.0

Manifest digest

sha256:8e9206d1d96090d5287e53bd1362b9209f9a208f7cb02b42cb5b9b0cc6341d7c

OS/ARCH

linux/amd64

Compressed size

19.46 GB

Last pushed

over 4 years by chrisamiller

Type

Image

Manifest digest

sha256:8e9206d1d96090d5287e53bd1362b9209f9a208f7cb02b42cb5b9b0cc6341d7c

Image Layers

Image Layers

1ADD file ... in / 48.1 MB
2CMD ["bash"]0 B
3/bin/sh -c set -eux; apt-get7.47 MB
4/bin/sh -c set -ex; if9.53 MB
5/bin/sh -c apt-get update &&49.44 MB
6/bin/sh -c set -ex; apt-get183.51 MB
7ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
8ENV LANG=C.UTF-80 B
9/bin/sh -c set -eux; apt-get5.86 MB
10ENV GPG_KEY=0D96DF4D4110E5C43FBFB17F2D347EA6AA65421D0 B
11ENV PYTHON_VERSION=3.7.120 B
12/bin/sh -c set -eux; wget15.59 MB
13/bin/sh -c set -eux; for238 B
14ENV PYTHON_PIP_VERSION=21.2.40 B
15ENV PYTHON_SETUPTOOLS_VERSION=57.5.00 B
16ENV PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/2caf84b14febcda8077e59e9b8a6ef9a680aa392/public/get-pip.py0 B
17ENV PYTHON_GET_PIP_SHA256=7c5239cea323cadae36083079a5ee6b2b3d56f25762a0c060d2867b89e5e06c50 B
18/bin/sh -c set -eux; wget2.24 MB
19CMD ["python3"]0 B
20MAINTAINER Susanna Kiwala <[email protected]>0 B
21LABEL description=Image for pVACtools version=3.0.0_mhci_3.1.2_mhcii_3.1.60 B
22RUN /bin/sh -c apt-get update14.93 MB
23RUN /bin/sh -c mkdir /opt/iedb157 B
24COPY LICENSE /opt/iedb/. # buildkit614 B
25WORKDIR /opt/iedb32 B
26RUN /bin/sh -c wget https://downloads.iedb.org/tools/mhci/3.1.2/IEDB_MHC_I-3.1.2.tar.gz360.52 MB
27RUN /bin/sh -c tar -xzvf347.02 MB
28WORKDIR /opt/iedb/mhc_i32 B
29RUN /bin/sh -c ./configure #210.63 KB
30COPY netmhccons_1_1_python_interface.3.1.1.py /opt/iedb/mhc_i/method/netmhccons-1.1-executable/netmhccons_1_1_executable/netmhccons_1_1_python_interface.py # buildkit1.78 KB
31WORKDIR /opt/iedb32 B
32RUN /bin/sh -c rm IEDB_MHC_I-3.1.2.tar.gz182 B
33WORKDIR /opt/iedb32 B
34RUN /bin/sh -c wget https://downloads.iedb.org/tools/mhcii/3.1.6/IEDB_MHC_II-3.1.6.tar.gz740.21 MB
35RUN /bin/sh -c tar -xzvf721.54 MB
36WORKDIR /opt/iedb/mhc_ii32 B
37RUN /bin/sh -c python ./configure.py649.22 KB
38WORKDIR /opt/iedb32 B
39RUN /bin/sh -c rm IEDB_MHC_II-3.1.6.tar.gz184 B
40WORKDIR /opt32 B
41RUN /bin/sh -c wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.12.0/ncbi-blast-2.12.0+-x64-linux.tar.gz235.47 MB
42RUN /bin/sh -c tar zxvpf243.18 MB
43RUN /bin/sh -c rm ncbi-blast-2.12.0+-x64-linux.tar.gz164 B
44RUN /bin/sh -c mkdir /opt/blastdb160 B
45ENV BLASTDB=/opt/blastdb0 B
46WORKDIR /opt/blastdb32 B
47RUN /bin/sh -c perl /opt/ncbi-blast-2.12.0+/bin/update_blastdb.pl14.9 GB
48RUN /bin/sh -c mkdir /opt/mhcflurry_data168 B
49ENV MHCFLURRY_DATA_DIR=/opt/mhcflurry_data0 B
50RUN /bin/sh -c pip install1.03 GB
51RUN /bin/sh -c pip install350.91 MB
52RUN /bin/sh -c mhcflurry-downloads fetch282.15 MB
53CMD ["/bin/bash"]0 B

Command

ADD file:a290acee3581e1e9c42c0a37b53086a8f070cb0730179be81a6ba24a620b6ee4 in /