chrisamiller/phlat:1.1_withindex

Manifest digest

sha256:357eb8530b0fc908cada8edfaddf282b2392374a4d86d6169c7d380b7e08b8e2

OS/ARCH

linux/amd64

Compressed size

3.89 GB

Last pushed

about 4 years by chrisamiller

Type

Image

Manifest digest

sha256:357eb8530b0fc908cada8edfaddf282b2392374a4d86d6169c7d380b7e08b8e2

Image Layers

1ADD file ... in / 29.01 MB

2CMD ["bash"]0 B

3RUN /bin/sh -c apt-get update254.78 MB

4RUN /bin/sh -c pip2 install8.16 MB

5COPY /usr/local/bin/samtools /usr/local/bin/samtools # buildkit317.3 KB

6COPY /usr/local/lib/libhts.so* /usr/local/lib/libtinfow.so* /usr/local/lib/libdeflate.so* /usr/local/lib/1.87 MB

7WORKDIR /usr/32 B

8ADD https://anaconda.org/bioconda/bowtie2/2.2.4/download/linux-64/bowtie2-2.2.4-py27_1.tar.bz2 /opt/ # buildkit10.1 MB

9RUN /bin/sh -c tar -xvjf10.2 MB

10RUN /bin/sh -c rm -f148 B

11ADD https://github.com/broadinstitute/picard/releases/download/2.18.1/picard.jar ./ # buildkit11.69 MB

12RUN /bin/sh -c mkdir /opt/picard-2.18.1154 B

13RUN /bin/sh -c mv picard.jar11.69 MB

14RUN /bin/sh -c ln -s133 B

15RUN /bin/sh -c ln -s135 B

16WORKDIR /opt/32 B

17COPY ./phlat-release/ ./ # buildkit3.56 GB

Command

ADD file:11157b07dde10107f3f6f2b892c869ea83868475d5825167b5f466a7e410eb05 in /