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chambm/omicron-simple-cfncluster:latest

Manifest digest

sha256:e9263c311dd54264b2352410576ad12d589bbb2e9fd0ef675e0f3b24dbee5adf

OS/ARCH

linux/amd64

Compressed size

717.21 MB

Last pushed

about 10 years by chambm

Type

Image

Manifest digest

sha256:e9263c311dd54264b2352410576ad12d589bbb2e9fd0ef675e0f3b24dbee5adf

Image Layers

Image Layers

1ADD file ... in /62.66 MB
2/bin/sh -c set -xe &&69.88 KB
3/bin/sh -c rm -rf /var/lib/apt/lists/*364 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'680 B
5/bin/sh -c mkdir -p /run/systemd161 B
6CMD ["/bin/bash"]0 B
7MAINTAINER Björn A. Grüning,0 B
8ENV DEBIAN_FRONTEND=noninteractive0 B
9/bin/sh -c apt-get -qq update191.24 MB
10/bin/sh -c git clone --branch1.47 MB
11MAINTAINER Björn A. Grüning,0 B
12ENV GALAXY_RELEASE=release_16.07 GALAXY_REPO=https://github.com/galaxyproject/galaxy GALAXY_ROOT=/galaxy-central0 B
13ENV GALAXY_CONFIG_FILE=/etc/galaxy/galaxy.ini GALAXY_CONFIG_JOB_CONFIG_FILE=/etc/galaxy/job_conf.xml GALAXY_CONFIG_JOB_METRICS_CONFIG_FILE=/etc/galaxy/job_metrics_conf.xml0 B
14/bin/sh -c locale-gen en_US.UTF-8 &&329.71 KB
15/bin/sh -c groupadd -r postgres2.03 KB
16/bin/sh -c apt-get -qq update151.48 MB
17/bin/sh -c groupadd -r $GALAXY_USER21.5 KB
18ADD file ... in /home/galaxy/.bashrc 1.71 KB
19/bin/sh -c mkdir $GALAXY_ROOT &&14.77 MB
20/bin/sh -c su $GALAXY_USER -c19.39 KB
21ADD file ... in /etc/galaxy/reports_wsgi.ini 1.51 KB
22ADD file ... in /home/galaxy/ephemeris/sample_tool_list.yaml 439 B
23ADD dir:a8752c6b47800e560c101e9bb79c7095e925aad4c322ae464074ca7b40ca3954 in /tmp/ansible/roles 31.28 KB
24ADD file ... in /tmp/ansible/provision.yml 245 B
25ADD file ... in /tmp/ansible/postgresql_provision.yml 366 B
26/bin/sh -c ansible-playbook /tmp/ansible/postgresql_provision.yml &&68.24 MB
27/bin/sh -c mkdir /shed_tools &&152 B
28USER [galaxy]0 B
29WORKDIR /galaxy-central0 B
30ENV GALAXY_CONFIG_DATABASE_CONNECTION=postgresql://galaxy:galaxy@localhost:5432/galaxy?client_encoding=utf8 [email protected] GALAXY_CONFIG_MASTER_API_KEY=HSNiugRFvgT574F43jZ7N9F30 B
31/bin/sh -c ./scripts/common_startup.sh && 130.54 MB
32ADD file ... in /etc/galaxy/web/welcome_image.png 49.49 KB
33ADD file ... in /etc/galaxy/web/welcome.html 1.06 KB
34USER [root]0 B
35ADD file ... in /usr/local/bin/setup_postgresql.py 1.28 KB
36/bin/sh -c rm $PG_DATA_DIR_DEFAULT -rf7.81 MB
37ADD file ... in /home/galaxy/tool_sheds_conf.xml 351 B
38ADD file ... in /usr/bin/add-tool-shed 572 B
39ADD file ... in /usr/bin/startup_lite 789 B
40ADD file ... in /usr/bin/install-tools 906 B
41ADD file ... in /usr/bin/install-biojs 340 B
42/bin/sh -c chmod +x /usr/bin/install-tools1.95 KB
43/bin/sh -c echo "DISCARD_SESSION_KEYRING_ON_STARTUP=False" >223 B
44ENV GALAXY_CONFIG_INTEGRATED_TOOL_PANEL_CONFIG=/export/galaxy-central/integrated_tool_panel.xml0 B
45EXPOSE 80/tcp0 B
46EXPOSE 21/tcp0 B
47EXPOSE 8800/tcp0 B
48EXPOSE 9002/tcp0 B
49VOLUME [/export/ /data/ /var/lib/docker]0 B
50CMD ["/usr/bin/startup"]0 B
51MAINTAINER Matt Chambers, [email protected]0 B
52/bin/sh -c apt-get -qq update12.72 MB
53/bin/sh -c add-tool-shed --url 'http://testtoolshed.g2.bx.psu.edu/'47.84 MB
54USER [galaxy]0 B
55ENV GALAXY_CONFIG_BRAND=Omicron (simple) ENABLE_TTS_INSTALL=True0 B
56WORKDIR /galaxy-central0 B
57USER [root]0 B
58COPY multi:47554b3ed53501a0f4be7ed02fd259c5445f97fba703b8f607856fe3c133366f in /tmp/ 3.37 KB
59COPY file:18cf4869365cd66af0ae3790c528473ed6d2c35b8730d7a5be50b7ff96c383f0 in /usr/bin/import-workflow 876 B
60/bin/sh -c import-workflow /tmp/*.ga3.75 MB
61VOLUME [/export/ /data/ /var/lib/docker]0 B
62EXPOSE 21/tcp 80/tcp 8800/tcp0 B
63CMD ["/usr/bin/startup"]0 B
64MAINTAINER Matt Chambers, [email protected]0 B
65/bin/sh -c apt-key adv --keyserver23.28 MB
66ENV NONUSE=reports,slurmd,slurmctld SLURM_CONF=/opt/slurm/etc/slurm.conf GALAXY_CONFIG_ALLOW_USER_DATASET_PURGE=True0 B
67/bin/sh -c mkdir /src &&807.63 KB
68ADD file ... in /etc/galaxy/job_conf.xml 753 B
69ENV DRMAA_LIBRARY_PATH=/usr/local/lib/libdrmaa.so0 B
70/bin/sh -c sed -i.bak 's/^\(PassivePorts\).*/\11.25 KB
71/bin/sh -c virtualenv --always-copy --relocatable87.94 KB
72VOLUME [/export/ /data/ /var/lib/docker]0 B
73EXPOSE 21/tcp 80/tcp 8800/tcp0 B
74CMD ["/usr/bin/startup"]0 B

Command

ADD file:ada91758a31d8de3c78ea0065fbc866430a71eb58bf5c4cb403d47052b1cade0 in /