cc2qe/sv-pipeline:v1

Manifest digest

sha256:bf1ad722ea2a794aefd6dcf45816ce63c5a8e99c6504ff7739244856eb0c2f01

OS/ARCH

linux/amd64

Compressed size

807.74 MB

Last pushed

over 9 years by cc2qe

Type

Image

Manifest digest

sha256:bf1ad722ea2a794aefd6dcf45816ce63c5a8e99c6504ff7739244856eb0c2f01

Image Layers

1ADD file ... in / 62.65 MB

2/bin/sh -c set -xe &&69.88 KB

3/bin/sh -c rm -rf /var/lib/apt/lists/*357 B

4/bin/sh -c sed -i 's/^#\s*$deb.*universe$$/\1/g'680 B

5/bin/sh -c mkdir -p /run/systemd162 B

6CMD ["/bin/bash"]0 B

7LABEL maintainer=Dave Larson <[email protected]>0 B

8/bin/sh -c export EXTRACT_SV_READS_VERSION=1.1.0 254.14 MB

9ENV PATH=/opt/ccdg/samtools-1.3.1/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

10

ENV PATH=/opt/ccdg/python-2.7.12/bin:/opt/ccdg/samtools-1.3.1/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

11/bin/sh -c cd /opt 299.39 MB

12

ENV PATH=/opt/speedseq/bin:/opt/ccdg/python-2.7.12/bin:/opt/ccdg/samtools-1.3.1/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

13ENV SHELL=/bin/bash0 B

14/bin/sh -c pip install --upgrade191.49 MB

15ENV REF_PATH=/data/.cache/%2s/%2s/%s0 B

16ENV REF_CACHE=/data/.cache/%2s/%2s/%s0 B

17CMD ["/bin/bash"]0 B

Command

ADD file:a642bdc2d8d6e4484e4419fc938e24b03454e36f389233f2ce77fc04722da900 in /