bids/mrtrix3_connectome:0.5.3

Manifest digest

sha256:3e742d2a9d1e5e118756fa8789bd8edb4a52cb011893815ce12a0b3267878113

OS/ARCH

linux/amd64

Compressed size

10.53 GB

Last pushed

about 4 years by lestropie

Type

Image

Manifest digest

sha256:3e742d2a9d1e5e118756fa8789bd8edb4a52cb011893815ce12a0b3267878113

Image Layers

Image Layers

1ADD file ... in / 25.47 MB

2CMD ["bash"]0 B

3MAINTAINER Robert E. Smith0 B

4/bin/sh -c apt-get update &&210.04 MB

5/bin/sh -c curl -sL https://deb.nodesource.com/setup_12.x21.58 MB

6COPY file:ab5dc2b6ebc6520d1acf8b6bf2786e4d80a2572d9663d19eb3ebd29d77463c1d in /neurodebian.gpg 3.24 KB

7/bin/sh -c wget -qO- http://neuro.debian.net/lists/bionic.au.full3.07 KB

8/bin/sh -c apt-get update &&11.38 MB

9

/bin/sh -c wget -qO- https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linux-centos8_x86_64-7.1.1.tar.gz

2.37 GB

10

/bin/sh -c echo "cHJpbnRmICJyb2JlcnQuc21pdGhAZmxvcmV5LmVkdS5hdVxuMjg1NjdcbiAqQ3FLLjFwTXY4ZE5rXG4gRlNvbGRZRXRDUFZqNlxuIiA+IC9vcHQvZnJlZXN1cmZlci9saWNlbnNlLnR4dAo=" |

291 B

11/bin/sh -c apt-get install -y80.33 MB

12/bin/sh -c wget -q http://fsl.fmrib.ox.ac.uk/fsldownloads/fslinstaller.py6.39 GB

13/bin/sh -c which immv ||1.25 GB

14/bin/sh -c wget -qO- "https://www.nitrc.org/frs/download.php/5994/ROBEXv12.linux64.tar.gz//?i_agree=1&download_now=1"51.49 MB

15/bin/sh -c npm install -gq99.23 MB

16/bin/sh -c apt-get remove -y221.03 KB

17

/bin/sh -c wget -q https://object.cscs.ch/v1/AUTH_4791e0a3b3de43e2840fe46d9dc2b334/ext-d000035_AAL1Atlas_pub/Release2018_SPM12/aal_for_SPM12.zip

684.84 KB

18/bin/sh -c wget -q https://github.com/AlistairPerry/CCA/raw/master/parcellations/512inMNI.nii60.96 KB

19/bin/sh -c wget -qO- http://www.nitrc.org/frs/download.php/5906/ADHD200_parcellations.tar.gz26.18 KB

20/bin/sh -c wget -q "https://s3-eu-west-1.amazonaws.com/pfigshare-u-files/5528816/lh.HCPMMP1.annot"657 KB

21/bin/sh -c mkdir /opt/brainnetome &&23.23 MB

22/bin/sh -c wget -qO- "https://github.com/ThomasYeoLab/CBIG/archive/v0.11.1-Wu2017_RegistrationFusion.tar.gz"1016.51 KB

23ENV ANTSPATH=/usr/lib/ants FREESURFER_HOME=/opt/freesurfer FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B

24/bin/sh -c git clone https://github.com/MRtrix3/mrtrix3.git21.79 MB

25/bin/sh -c wget -q "https://osf.io/v8n5g/download"3.32 KB

26COPY file:442b87ba3c945f50f9aa141241875c6d7286545bf04b1669e6433a2e16a74b36 in /mrtrix3_connectome.py 38.62 KB

27/bin/sh -c chmod 775 /mrtrix3_connectome.py38.62 KB

28COPY file:235dfb5d1c41584da85386f706ed42e6ca0980f3a4c95b8e69ad1a783dee369d in /version 108 B

29ENTRYPOINT ["/mrtrix3_connectome.py"]0 B

Command

ADD file:0eb7f0555d03ff4f0755bba2c3d133e68737888f41390c17710f64b70c8e662a in /