bids/mrtrix3_connectome:0.5.1

Manifest digest

sha256:f3e7a20ac3eb1ca674b9896ff3b04a595192f9923f853fcc573e1ca42fa4ebaf

OS/ARCH

linux/amd64

Compressed size

10.76 GB

Last pushed

over 4 years by lestropie

Type

Image

Manifest digest

sha256:f3e7a20ac3eb1ca674b9896ff3b04a595192f9923f853fcc573e1ca42fa4ebaf

Image Layers

Image Layers

1ADD file ... in / 25.46 MB

2/bin/sh -c set -xe &&852 B

3/bin/sh -c [ -z "$(apt-get0 B

4/bin/sh -c mkdir -p /run/systemd162 B

5CMD ["/bin/bash"]0 B

6MAINTAINER Robert E. Smith0 B

7/bin/sh -c apt-get update &&207.23 MB

8/bin/sh -c curl -sL https://deb.nodesource.com/setup_12.x21.8 MB

9COPY file:ab5dc2b6ebc6520d1acf8b6bf2786e4d80a2572d9663d19eb3ebd29d77463c1d in /neurodebian.gpg 3.24 KB

10/bin/sh -c wget -qO- http://neuro.debian.net/lists/bionic.au.full135.18 KB

11/bin/sh -c apt-get update &&11.32 MB

12

/bin/sh -c wget -qO- https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/7.1.1/freesurfer-linux-centos8_x86_64-7.1.1.tar.gz

2.37 GB

13

/bin/sh -c echo "cHJpbnRmICJyb2JlcnQuc21pdGhAZmxvcmV5LmVkdS5hdVxuMjg1NjdcbiAqQ3FLLjFwTXY4ZE5rXG4gRlNvbGRZRXRDUFZqNlxuIiA+IC9vcHQvZnJlZXN1cmZlci9saWNlbnNlLnR4dAo=" |

291 B

14/bin/sh -c apt-get install -y80.33 MB

15/bin/sh -c wget -q http://fsl.fmrib.ox.ac.uk/fsldownloads/fslinstaller.py6.57 GB

16/bin/sh -c which immv ||1.32 GB

17/bin/sh -c wget -qO- "https://www.nitrc.org/frs/download.php/5994/ROBEXv12.linux64.tar.gz//?i_agree=1&download_now=1"51.49 MB

18/bin/sh -c npm install -gq88.04 MB

19/bin/sh -c apt-get remove -y222.1 KB

20

/bin/sh -c wget -q https://object.cscs.ch/v1/AUTH_4791e0a3b3de43e2840fe46d9dc2b334/ext-d000035_AAL1Atlas_pub/Release2018_SPM12/aal_for_SPM12.zip

684.84 KB

21/bin/sh -c wget -q https://github.com/AlistairPerry/CCA/raw/master/parcellations/512inMNI.nii60.96 KB

22/bin/sh -c wget -qO- http://www.nitrc.org/frs/download.php/5906/ADHD200_parcellations.tar.gz26.18 KB

23/bin/sh -c wget -q "https://s3-eu-west-1.amazonaws.com/pfigshare-u-files/5528816/lh.HCPMMP1.annot"657 KB

24/bin/sh -c mkdir /opt/brainnetome &&8.03 KB

25/bin/sh -c wget -qO- "https://github.com/ThomasYeoLab/CBIG/archive/v0.11.1-Wu2017_RegistrationFusion.tar.gz"1016.48 KB

26ENV ANTSPATH=/usr/lib/ants FREESURFER_HOME=/opt/freesurfer FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B

27/bin/sh -c git clone https://github.com/MRtrix3/mrtrix3.git21.79 MB

28/bin/sh -c wget -q "https://osf.io/v8n5g/download"3.32 KB

29COPY file:2f68fd7891e6948e90e40b2338b488a537e138af3eb2176a3c2912f3f0d635e6 in /mrtrix3_connectome.py 38.45 KB

30/bin/sh -c chmod 775 /mrtrix3_connectome.py38.45 KB

31COPY file:fa0badc3209e51e050a0dac0f6f5729fae74ff804d4ea365172657f6f8e0bedf in /version 108 B

32ENTRYPOINT ["/mrtrix3_connectome.py"]0 B

Command

ADD file:4974bb5483c392fb54a35f3799802d623d14632747493dce5feb4d435634b4ac in /