bcgsc/mavis:v3.0.0-alpha

Manifest digest

sha256:845bb34ac0c80e2c5f5ec33de910e29ce9ad65dcce54c9b7ae9197a936f55fef

OS/ARCH

linux/amd64

Compressed size

310.87 MB

Last pushed

over 5 years by creisle

Type

Image

Manifest digest

sha256:845bb34ac0c80e2c5f5ec33de910e29ce9ad65dcce54c9b7ae9197a936f55fef

Image Layers

1ADD file ... in / 25.88 MB

2CMD ["bash"]0 B

3ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

4ENV LANG=C.UTF-80 B

5/bin/sh -c set -eux; apt-get2.64 MB

6ENV GPG_KEY=0D96DF4D4110E5C43FBFB17F2D347EA6AA65421D0 B

7ENV PYTHON_VERSION=3.7.100 B

8/bin/sh -c set -ex &&9.6 MB

9/bin/sh -c cd /usr/local/bin &&233 B

10ENV PYTHON_PIP_VERSION=21.0.10 B

11ENV PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/29f37dbe6b3842ccd52d61816a3044173962ebeb/public/get-pip.py0 B

12ENV PYTHON_GET_PIP_SHA256=e03eb8a33d3b441ff484c56a436ff10680479d4bd14e59268e67977ed40904de0 B

13/bin/sh -c set -ex; savedAptMark="$(apt-mark2.34 MB

14CMD ["python3"]0 B

15WORKDIR /app125 B

16/bin/sh -c apt-get update &&82.97 MB

17/bin/sh -c apt-get install -y1.17 MB

18/bin/sh -c git clone https://github.com/lh3/bwa.git3.75 MB

19/bin/sh -c apt-get install -y601.28 KB

20/bin/sh -c wget http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/blat/blat &&2.54 MB

21COPY file:3b6f50f424f078787d39d104f1b60582804b39f39214b7ba1177fb99934a1db2 in setup.py 1.77 KB

22COPY file:74040631468496ce0186d78e6c9041242ad20e44bc4d29ba5b992e37bd305c31 in setup.cfg 361 B

23COPY dir:04afd9ec0790ebc0beb3d5dbcf600ded2da0bd768db7e5e75fe54ad70e81c015 in src 161.98 KB

24COPY file:b399acc840d204bfad6b308b38b9b90fde8a54a8f8b7a38cfe73d265c525697c in LICENSE.txt 5.43 KB

25COPY file:24da313533d66ed92075ce5e7ad351da66cc36d37bb71708481c4c86a530e2c4 in README.md 1.29 KB

26/bin/sh -c pip install -U5.15 MB

27/bin/sh -c pip install .174.08 MB

28/bin/sh -c which mavis0 B

29ENTRYPOINT ["mavis"]0 B

Command

ADD file:c855b3c65f5ba94d548d7d2659094eeb63fbf7f8419ac8e07712c3320c38b62c in /